WormBase Tree Display for Gene: WBGene00272447

WBGene00272447 SMap: S_parent: Sequence: PPA_ChrIII
  Identity: Version: 6
    Name: CGC_name: Ppa-atp-2 From_analysis: Inferred_from_orthology
      Sequence_name: PPA34078
      Molecular_name: PPA34078
        PPA34078.1
        PP21147
      Public_name: Ppa-atp-2
    Species: Pristionchus pacificus
    History: Version_change: 1 24 Nov 2017 16:14:21 WBPerson4055 Event: Created
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Ppa-atp-2
        3 08 Feb 2019 15:42:28 WBPerson1983 Name_change: CGC_name: Removed
        4 08 May 2019 10:09:26 WBPerson1983 Name_change: CGC_name: Ppa-atp-2
        5 28 May 2021 19:05:20 WBPerson1983 Name_change: CGC_name: Removed
        6 28 Jul 2021 11:12:29 WBPerson1983 Name_change: CGC_name: Ppa-atp-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: atp
    RNASeq_FPKM: WBls:0000032 18.3063 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 11.5072 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        16.2153 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    GO_annotation: 00280628
      00280629
      00280630
      00280631
      00280632
      00280633
      00280634
    Ortholog (35)
    Paralog: WBGene00099021 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00108325 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00112207 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00113083 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00278073 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00278338 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00281648 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00305099 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable ATP binding activity; ATP hydrolysis activity; and proton-transporting ATP synthase activity, rotational mechanism. Predicted to be involved in proton motive force-driven ATP synthesis and proton transmembrane transport. Predicted to be part of proton-transporting ATP synthase complex, catalytic core F(1). Is an ortholog of C. elegans atp-2. In C. elegans, atp-2 is involved in several processes, including determination of adult lifespan; inductive cell migration; and pharyngeal pumping. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA34078
    Corresponding_transcript: PPA34078.1
    Other_sequence (442)
  Experimental_info: Microarray_results: GPL14372_Probes_36894
      GPL14372_Probes_36895
      GPL14372_Probes_36896
      GPL14372_Probes_36897
      GPL14372_Probes_36898
      GPL14372_Probes_36899
      GPL14372_Probes_36900
      GPL14372_Probes_36901
    Expression_cluster: WBPaper00041207:PP_dauer_down
      WBPaper00041466:PP_germline-ablation_regulated
      WBPaper00041606:PP_S.marcescens_regulated
      WBPaper00041606:PP_X.nematophila_regulated
  Remark: [190208 pad] The CGC name Ppa-atp-2 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Ppa-atp-2 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene