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WormBase Tree Display for Gene: WBGene00272487

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Name Class

WBGene00272487SMapS_parentSequencePPA_ChrIII
IdentityVersion5
NameSequence_namePPA34118
Molecular_namePPA34118
PPA34118.1
PP51874
Public_namePPA34118
SpeciesPristionchus pacificus
HistoryVersion_change124 Nov 2017 16:14:21WBPerson4055EventCreated
220 Mar 2018 10:26:12WBPerson4025Name_changeCGC_namePpa-sql-1.1
308 Feb 2019 15:42:29WBPerson1983Name_changeCGC_nameRemoved
408 May 2019 10:09:27WBPerson1983Name_changeCGC_namePpa-sql-1.1
528 May 2021 19:05:21WBPerson1983Name_changeCGC_nameRemoved
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000324.96955From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010117.606From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
4.96955From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
7.52518From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
Ortholog (15)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: ShK domain-like and ShKT domain.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA34118
Corresponding_transcriptPPA34118.1
Other_sequence (24)
Experimental_infoMicroarray_resultsGPL14372_Probes_42457
GPL14372_Probes_42458
GPL14372_Probes_42459
GPL14372_Probes_42460
GPL14372_Probes_42461
GPL14372_Probes_42462
GPL14372_Probes_83558
GPL14372_Probes_83559
GPL14372_Probes_83560
Expression_clusterWBPaper00041207:PP_dauer_up
WBPaper00041466:PP_germline-ablation_regulated
Remark[190208 pad] The CGC name Ppa-sql-1.1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Ppa-sql-1.1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene