WormBase Tree Display for Gene: WBGene00275840

WBGene00275840 SMap: S_parent: Sequence: PPA_ChrIII
  Identity: Version: 3
    Name: Sequence_name: PPA37471
      Molecular_name: PPA37471
        PPA37471.1
        PP57679
      Public_name: PPA37471
    Species: Pristionchus pacificus
    History: Version_change: 1 24 Nov 2017 16:14:21 WBPerson4055 Event: Created
        2 08 May 2019 10:09:23 WBPerson1983 Name_change: CGC_name: Ppa-pph-4.1
        3 28 May 2021 19:05:21 WBPerson1983 Name_change: CGC_name: Removed
    Status: Live
  Gene_info: Biotype: SO:0001217
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
        3.06283 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        9.18848 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    GO_annotation: 00282551
    Ortholog (47)
    Paralog (59)
    Structured_description: Automated_description: Predicted to enable hydrolase activity. Is an ortholog of C. elegans pph-4.1 and pph-4.2. In C. elegans, pph-4.1 is involved in chiasma assembly; embryo development; and regulation of meiotic DNA double-strand break formation involved in reciprocal meiotic recombination. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA37471
    Corresponding_transcript: PPA37471.1
    Other_sequence (84)
  Experimental_info: Microarray_results: GPL14372_Probes_66985
      GPL14372_Probes_66986
      GPL14372_Probes_66987
      GPL14372_Probes_66988
      GPL14372_Probes_66990
      GPL14372_Probes_66991
      GPL14372_Probes_66993
    Expression_cluster: WBPaper00041207:PP_dauer_up
      WBPaper00041466:PP_germline-ablation_regulated
  Remark: [210528 pad] The CGC name Ppa-pph-4.1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene