WormBase Tree Display for Gene: WBGene00275877

WBGene00275877 SMap: S_parent: Sequence: PPA_ChrIII
  Identity: Version: 1
    Name: Sequence_name: PPA37508
      Molecular_name: PPA37508
        PPA37508.1
        PP22446
      Public_name: PPA37508
    Species: Pristionchus pacificus
    History: Version_change: 1 24 Nov 2017 16:14:21 WBPerson4055 Event: Created
    Status: Live
  Gene_info: Biotype: SO:0001217
    RNASeq_FPKM: WBls:0000032 78.1224 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 47.5772 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        64.6092 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Ortholog (26)
    Paralog: WBGene00100914 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00104917 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00272065 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00273107 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00274521 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00277397 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Zinc finger, RING-type; Zinc finger, RING/FYVE/PHD-type; and Zinc finger, C3HC4 type (RING finger). Is an ortholog of C. elegans rnf-5. In C. elegans, rnf-5 is involved in several processes, including inductive cell migration; striated muscle cell development; and ubiquitin-dependent protein catabolic process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA37508
    Corresponding_transcript: PPA37508.1
    Other_sequence (67)
  Experimental_info: Microarray_results: GPL14372_Probes_47559
      GPL14372_Probes_47561
    Expression_cluster: WBPaper00041207:PP_dauer_up
      WBPaper00041466:PP_germline-ablation_regulated
  Method: Gene