WormBase Tree Display for Gene: WBGene00277035
expand all nodes | collapse all nodes | view schema
| WBGene00277035 | SMap | S_parent | Sequence | PPA_ChrIV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | |||||||
| Name | CGC_name | Ppa-swsn-4.3 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA38666 | ||||||||
| Molecular_name | PPA38666 | ||||||||
| PPA38666.1 | |||||||||
| PP53644 | |||||||||
| Public_name | Ppa-swsn-4.3 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 24 Nov 2017 16:14:21 | WBPerson4055 | Event | Created | |||
| 2 | 04 Feb 2020 15:43:57 | WBPerson1983 | Name_change | CGC_name | Ppa-swsn-4.2 | ||||
| 3 | 04 Jun 2020 14:38:22 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Ppa-swsn-4.3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | swsn | ||||||||
| RNASeq_FPKM | WBls:0000032 | 89.3144 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 31.2514 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| 40.1886 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| GO_annotation | 00283432 | ||||||||
| 00283433 | |||||||||
| 00283434 | |||||||||
| 00283435 | |||||||||
| 00283436 | |||||||||
| Ortholog (58) | |||||||||
| Paralog (18) | |||||||||
| Structured_description | Automated_description | Predicted to enable ATP binding activity; ATP-dependent chromatin remodeler activity; and histone binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Is an ortholog of C. elegans swsn-4. In C. elegans, swsn-4 is involved in gonad development. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA38666 | |||||||
| Corresponding_transcript | PPA38666.1 | ||||||||
| Other_sequence (109) | |||||||||
| Experimental_info | Microarray_results (16) | ||||||||
| Expression_cluster | WBPaper00041207:PP_dauer_up | ||||||||
| WBPaper00041466:PP_germline-ablation_regulated | |||||||||
| Remark | [200603 pad] The CGC name Ppa-swsn-4.2 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| Method | Gene |
