WormBase Tree Display for Gene: WBGene00278625

WBGene00278625 SMap: S_parent: Sequence: PPA_ChrV
  Identity: Version: 4
    Name: CGC_name: Ppa-pigu-1 From_analysis: Inferred_from_orthology
      Sequence_name: PPA40256
      Molecular_name: PPA40256
        PPA40256.1
        PP66051
      Public_name: Ppa-pigu-1
    Species: Pristionchus pacificus
    History: Version_change: 1 24 Nov 2017 16:14:22 WBPerson4055 Event: Created
        2 08 May 2019 10:09:23 WBPerson1983 Name_change: CGC_name: Ppa-pigu-1
        3 28 May 2021 19:05:21 WBPerson1983 Name_change: CGC_name: Removed
        4 28 Jul 2021 11:12:28 WBPerson1983 Name_change: CGC_name: Ppa-pigu-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pigu
    RNASeq_FPKM: WBls:0000032 43.2391 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 15.5479 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        3.4046 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    GO_annotation: 00284585
      00284586
      00284587
    Ortholog: WBGene00030082 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00226176 Brugia malayi From_analysis: WormBase-Compara
      WBGene00011914 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00120386 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00238070 Onchocerca volvulus From_analysis: WormBase-Compara
      CBOVI.g10030 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g15483 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g6039 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g2906 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g10613 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g150 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g11910 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g13852 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g3469 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g5355 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g14219 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00015.g1017 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_00518.g11787 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-T22C1.3 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold498.g2232 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00909.g16664 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_10841 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_000410 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g11852 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g10497 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10073600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00070429 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00074447 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00258808 Strongyloides ratti From_analysis: WormBase-Compara
      chrI_pilon.g1483 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00299581 Trichuris muris From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in attachment of GPI anchor to protein. Predicted to be located in membrane. Predicted to be part of GPI-anchor transamidase complex. Is an ortholog of C. elegans pigu-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA40256
    Corresponding_CDS_history: PPA40256:pp270
      PPA40256:pp274
    Corresponding_transcript: PPA40256.1
    Other_sequence: LSC01163_1
      MJ01840
      CRC10604_1
      XIC04129_1
      JI479941.1
      Oden_isotig15276
      Name_isotig07900
      JI462319.1
      JI170612.1
      MI02953
      XI05070
      MAC01546_1
      MIC02473_1
      BE217709.1
      MJC00831_1
      Dviv_isotig25253
      PPC13048_1
      DIC00510_1
      Oden_isotig15277
      Tcol_isotig17259
      Acan_isotig10516
      DI01533
      MA02210
  Experimental_info: Microarray_results: GPL14372_Probes_48347
      GPL14372_Probes_48348
      GPL14372_Probes_48349
    Expression_cluster: WBPaper00041207:PP_dauer_up
      WBPaper00041466:PP_germline-ablation_regulated
  Remark: [210528 pad] The CGC name Ppa-pigu-1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene