WormBase Tree Display for Gene: WBGene00280550
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WBGene00280550 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Identity | Version | 6 | ||||
Name | CGC_name | Ppa-plrg-1 | From_analysis | Inferred_from_orthology | ||
Sequence_name | PPA42181 | |||||
Molecular_name | PPA42181 | |||||
PPA42181.1 | ||||||
PP71816 | ||||||
Public_name | Ppa-plrg-1 | |||||
Species | Pristionchus pacificus | |||||
History | Version_change (6) | |||||
Status | Live | |||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | plrg | |||||
RNASeq_FPKM | WBls:0000032 | 25.327 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | ||
RNASeq.pristionchus.WBls:0000032.control_median | ||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||||||
WBls:0000101 | 16.4184 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||
23.9281 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||
RNASeq.pristionchus.WBls:0000101.control_mean | ||||||
RNASeq.pristionchus.WBls:0000101.control_median | ||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | ||||||
Ortholog (33) | ||||||
Structured_description | Automated_description | Is predicted to encode a protein with the following domains: WD domain, G-beta repeat; WD40-repeat-containing domain superfamily; G-protein beta WD-40 repeat; WD40/YVTN repeat-like-containing domain superfamily; Ribosomal protein S24/S35, mitochondrial, conserved domain; WD40 repeat; and Mitochondrial ribosomal subunit protein. Is an ortholog of C. elegans plrg-1. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | PPA42181 | ||||
Corresponding_transcript | PPA42181.1 | |||||
Other_sequence (119) | ||||||
Experimental_info | Microarray_results | GPL14372_Probes_91241 | ||||
GPL14372_Probes_91245 | ||||||
GPL14372_Probes_91246 | ||||||
GPL14372_Probes_91247 | ||||||
GPL14372_Probes_91248 | ||||||
GPL14372_Probes_91250 | ||||||
GPL14372_Probes_91251 | ||||||
GPL14372_Probes_91253 | ||||||
Expression_cluster | WBPaper00041466:PP_germline-ablation_regulated | |||||
WBPaper00041606:PP_X.nematophila_regulated | ||||||
Remark | [190208 pad] The CGC name Ppa-plrg-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||
[210528 pad] The CGC name Ppa-plrg-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||
Method | Gene |