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WormBase Tree Display for Gene: WBGene00281696

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Name Class

WBGene00281696SMapS_parentSequencePPA_ChrV
IdentityVersion6
NameCGC_namePpa-snx-3From_analysisInferred_from_orthology
Sequence_namePPA43327
Molecular_namePPA43327
PPA43327.1
PP63264
Public_namePpa-snx-3
SpeciesPristionchus pacificus
HistoryVersion_change124 Nov 2017 16:14:22WBPerson4055EventCreated
220 Mar 2018 10:26:12WBPerson4025Name_changeCGC_namePpa-snx-3
308 Feb 2019 15:42:28WBPerson1983Name_changeCGC_nameRemoved
408 May 2019 10:09:26WBPerson1983Name_changeCGC_namePpa-snx-3
528 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
628 Jul 2021 11:12:29WBPerson1983Name_changeCGC_namePpa-snx-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsnx
RNASeq_FPKMWBls:000003240.505From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010126.7939From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
39.8766From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00286362
Ortholog (28)
ParalogWBGene00102526Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00106826Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00274136Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable phosphatidylinositol binding activity. Is an ortholog of C. elegans snx-3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA43327
Corresponding_transcriptPPA43327.1
Other_sequence (65)
Experimental_infoMicroarray_resultsGPL14372_Probes_57572
GPL14372_Probes_57573
GPL14372_Probes_57574
Expression_clusterWBPaper00041207:PP_dauer_up
WBPaper00041466:PP_germline-ablation_regulated
Remark[190208 pad] The CGC name Ppa-snx-3 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Ppa-snx-3 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene