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WormBase Tree Display for Gene: WBGene00281885

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Name Class

WBGene00281885SMapS_parentSequencePPA_ChrIII
IdentityVersion6
NameCGC_namePpa-fre-1From_analysisInferred_from_orthology
Sequence_namePPA43516
Molecular_namePPA43516
PPA43516.1
PP58270
Public_namePpa-fre-1
SpeciesPristionchus pacificus
HistoryVersion_change124 Nov 2017 16:14:22WBPerson4055EventCreated
220 Mar 2018 10:26:11WBPerson4025Name_changeCGC_namePpa-fre-1
308 Feb 2019 15:42:28WBPerson1983Name_changeCGC_nameRemoved
408 May 2019 10:09:24WBPerson1983Name_changeCGC_namePpa-fre-1
528 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
628 Jul 2021 11:12:28WBPerson1983Name_changeCGC_namePpa-fre-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classfre
RNASeq_FPKMWBls:00000322.14255From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010112.6521From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
2.14255From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
4.93155From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00286498
00286499
Ortholog (32)
ParalogWBGene00108143Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00205847Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable FMN binding activity and oxidoreductase activity. Is an ortholog of C. elegans fre-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA43516
Corresponding_transcriptPPA43516.1
Other_sequence (14)
Experimental_infoMicroarray_resultsGPL14372_Probes_73015
GPL14372_Probes_73016
GPL14372_Probes_73020
Expression_clusterWBPaper00041207:PP_dauer_down
WBPaper00041466:PP_germline-ablation_regulated
Remark[190208 pad] The CGC name Ppa-fre-1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Ppa-fre-1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene