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WormBase Tree Display for Gene: WBGene00304470

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Name Class

WBGene00304470SMapS_parentSequencePPA_ChrV
IdentityVersion4
NameCGC_namePpa-snr-2From_analysisInferred_from_orthology
Sequence_namePPA46691
Molecular_namePPA46691
PPA46691.1
PP18439
Public_namePpa-snr-2
SpeciesPristionchus pacificus
HistoryVersion_change121 Feb 2019 14:49:04WBPerson4055EventCreated
208 May 2019 10:09:21WBPerson1983Name_changeCGC_namePpa-snr-2
328 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
428 Jul 2021 11:12:27WBPerson1983Name_changeCGC_namePpa-snr-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsnr
RNASeq_FPKMWBls:000003299.1893From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:0000101103.371From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
210.923From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
99.1893From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
Ortholog (31)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: LSM domain; LSM domain, eukaryotic/archaea-type; and LSM domain superfamily. Is an ortholog of C. elegans snr-2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA46691
Corresponding_CDS_historyPPA46691:pp275
Corresponding_transcriptPPA46691.1
Other_sequence (85)
Experimental_infoMicroarray_resultsGPL14372_Probes_65364
GPL14372_Probes_65366
GPL14372_Probes_65367
Expression_clusterWBPaper00041207:PP_dauer_up
WBPaper00041466:PP_germline-ablation_regulated
WBPaper00041606:PP_X.nematophila_regulated
Remark[210528 pad] The CGC name Ppa-snr-2 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene