WormBase Tree Display for Gene: WBGene00304628
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| WBGene00304628 | SMap | S_parent | Sequence | PPA_ChrV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | |||||||
| Name | CGC_name | Ppa-rps-20 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA46849 | ||||||||
| Molecular_name | PPA46849 | ||||||||
| PPA46849.1 | |||||||||
| PP74783 | |||||||||
| Public_name | Ppa-rps-20 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 21 Feb 2019 14:49:04 | WBPerson4055 | Event | Created | |||
| 2 | 08 May 2019 10:09:23 | WBPerson1983 | Name_change | CGC_name | Ppa-rps-20 | ||||
| 3 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 28 Jul 2021 11:12:28 | WBPerson1983 | Name_change | CGC_name | Ppa-rps-20 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rps | ||||||||
| RNASeq_FPKM | WBls:0000032 | 157.796 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 111.293 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 157.796 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| 176.084 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00302939 | ||||||||
| 00302940 | |||||||||
| 00302941 | |||||||||
| 00302942 | |||||||||
| Ortholog (29) | |||||||||
| Paralog | WBGene00274452 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in ribosome. Predicted to be part of small ribosomal subunit. Is an ortholog of C. elegans rps-20. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA46849 | |||||||
| Corresponding_transcript | PPA46849.1 | ||||||||
| Other_sequence (240) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_51906 | |||||||
| GPL14372_Probes_51908 | |||||||||
| Expression_cluster | WBPaper00041207:PP_dauer_up | ||||||||
| WBPaper00041466:PP_germline-ablation_regulated | |||||||||
| Remark | [210528 pad] The CGC name Ppa-rps-20 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| Method | Gene |
