WormBase Tree Display for Gene: WBGene00304946
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| WBGene00304946 | SMap | S_parent | Sequence | PPA_ChrII | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | Sequence_name | PPA47086 | |||||||
| Molecular_name | PPA47086 | ||||||||
| PPA47086.1 | |||||||||
| PP75325 | |||||||||
| Public_name | PPA47086 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 26 Sep 2019 11:39:39 | WBPerson4055 | Event | Split_from | WBGene00102358 | ||
| 2 | 04 Feb 2020 15:43:57 | WBPerson1983 | Name_change | CGC_name | Ppa-pqm-1.2 | ||||
| 3 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| Split_from | WBGene00102358 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| RNASeq_FPKM | WBls:0000032 | 11.6819 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| 3.89397 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| Ortholog (24) | |||||||||
| Paralog | WBGene00304432 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Zinc finger, C2H2 type; Zinc finger C2H2 superfamily; and Zinc finger C2H2-type. Is an ortholog of C. elegans pqm-1. In C. elegans, pqm-1 is involved in several processes, including defense response to other organism; positive regulation of macromolecule biosynthetic process; and regulation of vitellogenesis. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA47086 | |||||||
| Corresponding_transcript | PPA47086.1 | ||||||||
| Other_sequence | GRC02042_1 | ||||||||
| GR12953 | |||||||||
| SSC05109_1 | |||||||||
| SS03209 | |||||||||
| Remark | [210528 pad] The CGC name Ppa-pqm-1.2 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| Method | Gene |
