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WormBase Tree Display for Gene: WBGene00304947

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Name Class

WBGene00304947SMapS_parentSequencePPA_ChrII
IdentityVersion1
NameSequence_namePPA47087
Molecular_namePPA47087
PPA47087.1
PP75354
Public_namePPA47087
SpeciesPristionchus pacificus
HistoryVersion_change126 Sep 2019 11:52:19WBPerson4055EventSplit_fromWBGene00112389
Split_fromWBGene00112389
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
RNASeq.pristionchus.total_over_all_stages.control_mean
Ortholog (30)
ParalogWBGene00107972Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00273896Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00276940Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00304998Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in germ line based on microarray studies. Is predicted to encode a protein with the following domains: Triose-phosphate Transporter family and Sugar phosphate transporter domain. Is an ortholog of C. elegans sqv-7. In C. elegans, sqv-7 is involved in several processes, including egg-laying behavior; proteoglycan biosynthetic process; and pyrimidine nucleotide-sugar transmembrane transport.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA47087
Corresponding_transcriptPPA47087.1
Other_sequence (36)
Experimental_infoMicroarray_resultsGPL14372_Probes_64764
GPL14372_Probes_64765
GPL14372_Probes_64766
GPL14372_Probes_64767
GPL14372_Probes_64768
GPL14372_Probes_64770
Expression_clusterWBPaper00041207:PP_dauer_up
WBPaper00041466:PP_germline-ablation_regulated
WBPaper00045473:PP_Germline_Conserved_Operon
MethodGene