WormBase Tree Display for Gene: WBGene00304968

WBGene00304968 SMap: S_parent: Sequence: PPA_ChrI
  Identity: Version: 4
    Name: CGC_name: Ppa-par-4 From_analysis: Inferred_from_orthology
      Sequence_name: PPA47110
      Molecular_name: PPA47110
        PPA47110.1
        PP75332
      Public_name: Ppa-par-4
    Species: Pristionchus pacificus
    History: Version_change: 1 26 Sep 2019 11:35:22 WBPerson4055 Event: Split_from: WBGene00099917
        2 04 Feb 2020 15:43:56 WBPerson1983 Name_change: CGC_name: Ppa-par-4
        3 28 May 2021 19:05:21 WBPerson1983 Name_change: CGC_name: Removed
        4 28 Jul 2021 11:12:29 WBPerson1983 Name_change: CGC_name: Ppa-par-4
      Split_from: WBGene00099917
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: par
    RNASeq_FPKM: WBls:0000032 4.14754 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 1.38251 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        0 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    GO_annotation: 00303330
      00303331
      00303332
    Ortholog: WBGene00160669 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00028053 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00227191 Brugia malayi From_analysis: WormBase-Compara
      WBGene00003919 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00135544 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00243861 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00249742 Onchocerca volvulus From_analysis: WormBase-Compara
      CBOVI.g1217 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g9283 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g2394 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g4866 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g18410 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g3797 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g2486 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g16014 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g3656 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g23416 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00496.g11533 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-par-4 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g21876 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_03473.g30307 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_03944.g31673 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_22148 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_24653 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_021838 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g03248 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g10620 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_50408900 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00077103 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00257059 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00290617 Trichuris muris From_analysis: WormBase-Compara
      chrV_pilon.g17609 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog: WBGene00104703 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00107447 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00111361 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00113704 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00116530 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00304876 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable ATP binding activity and protein kinase activity. Is an ortholog of C. elegans par-4. In C. elegans, par-4 is involved in several processes, including asymmetric protein localization involved in cell fate determination; cell division; and determination of adult lifespan. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA47110
    Corresponding_transcript: PPA47110.1
    Other_sequence: CD374730.1
      TS00844
      BMC07272_1
      SRC06583_1
      PTC00192_1
      FC820314.1
      Acan_isotig18274
      PP01104
      PT00943
      TSC00393_1
      PPC04861_1
      JI166278.1
      Tcir_isotig08674
      WBC00604_1
      PPC11836_1
  Experimental_info: Microarray_results: GPL14372_Probes_48908
      GPL14372_Probes_48909
      GPL14372_Probes_48910
      GPL14372_Probes_48911
      GPL14372_Probes_48912
      GPL14372_Probes_48913
      GPL14372_Probes_48914
      GPL14372_Probes_48915
      GPL14372_Probes_48916
    Expression_cluster: WBPaper00041466:PP_germline-ablation_regulated
  Remark: [210528 pad] The CGC name Ppa-par-4 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene