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WormBase Tree Display for Gene: WBGene00305054

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Name Class

WBGene00305054SMapS_parentSequencePPA_ChrIV
IdentityVersion4
NameCGC_namePpa-cif-1From_analysisInferred_from_orthology
Sequence_namePPA47185
Molecular_namePPA47185
PPA47185.1
PP75721
Public_namePpa-cif-1
SpeciesPristionchus pacificus
HistoryVersion_change121 Oct 2019 15:14:52WBPerson4055EventSplit_fromWBGene00116655
204 Feb 2020 15:43:56WBPerson1983Name_changeCGC_namePpa-cif-1
328 May 2021 19:05:21WBPerson1983Name_changeCGC_nameRemoved
428 Jul 2021 11:12:29WBPerson1983Name_changeCGC_namePpa-cif-1
Split_fromWBGene00116655
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcif
RNASeq_FPKMWBls:00000329.7104From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010117.2027From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
8.97103From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
9.7104From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
Ortholog (26)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Proteasome component (PCI) domain and PCI domain. Is an ortholog of C. elegans cif-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA47185
Corresponding_transcriptPPA47185.1
Other_sequence (28)
Experimental_infoMicroarray_resultsGPL14372_Probes_81642
GPL14372_Probes_81643
GPL14372_Probes_81644
GPL14372_Probes_81645
GPL14372_Probes_81646
GPL14372_Probes_81647
GPL14372_Probes_81648
GPL14372_Probes_81649
GPL14372_Probes_81650
Expression_clusterWBPaper00041466:PP_germline-ablation_regulated
WBPaper00041606:PP_X.nematophila_regulated
Remark[210528 pad] The CGC name Ppa-cif-1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene