WormBase Tree Display for Gene: WBGene00306023

WBGene00306023 SMap: S_parent: Sequence: PPA_ChrV
  Identity: Version: 1
    Name: Sequence_name: PPA47380
      Molecular_name: PPA47380
        PPA47380.1
        PP75949
      Public_name: PPA47380
    Species: Pristionchus pacificus
    History: Version_change: 1 20 Jan 2020 15:06:34 WBPerson4055 Event: Split_from: WBGene00099227
      Split_from: WBGene00099227
    Status: Live
  Gene_info: Biotype: SO:0001217
    RNASeq_FPKM: WBls:0000032 5.40564 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 15.2794 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        40.4324 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
        5.40564 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
    GO_annotation: 00303678
    Ortholog (30)
    Paralog: WBGene00091716 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00093680 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00099275 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00112263 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00116898 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00204228 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00277970 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00279783 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00304671 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable ubiquitin-protein transferase activity. Is an ortholog of C. elegans wwp-1. In C. elegans, wwp-1 is involved in defense response to bacterium; protein ubiquitination; and regulation of protein catabolic process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA47380
    Corresponding_transcript: PPA47380.1
    Other_sequence (65)
  Experimental_info: Microarray_results: GPL14372_Probes_36566
      GPL14372_Probes_36567
      GPL14372_Probes_36568
      GPL14372_Probes_36569
      GPL14372_Probes_36570
      GPL14372_Probes_36571
      GPL14372_Probes_36572
      GPL14372_Probes_36573
      GPL14372_Probes_36574
      GPL14372_Probes_36575
    Expression_cluster: WBPaper00041207:PP_dauer_up
      WBPaper00041466:PP_germline-ablation_regulated
  Method: Gene