WormBase Tree Display for RNAi: WBRNAi00086675
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WBRNAi00086675 | Homol | Homol_homol | F54E7:RNAi | |||
---|---|---|---|---|---|---|
B0207:RNAi | ||||||
Sequence_info | DNA_text | atgcataacggtcgtggtggtcgatatgacgtttgccctcctccaccaccaccaccctatcactttaaccatgtgcatacaccgccgtcaaaagtcatcgtccagcagcagaaacagcaacaaaaagctcatcgagagccgccgccgagctatcctgcctccaaaatgaccaccacaaatgataatgttacggttagtaagagaaattttcaggcaaacgaagatcggatacacgtacaccgactcgagtgcgcgtctgatggtggaattctcgatatggatgatgttttagaagaagtttttgatttgaattatgatcagatcctggcaatcactgatgaagctaatggcggatcaactactccaacgtattctcaaattcaaaaacaacagcatcactatgcacaacctctaccatatgctaggaaattcgatggaggaccatcaacaccgattgcgagtgcttttggaagcgtaactgtcaaccatcaggctcaccgtgctgcatctccatataatgtcggatttgcaagaagcaattctcgagactttgcgccacagccaacacattcgaaagaacgacgcgactcggttgtcgaagtgagcagttttgatcagattccacaatctgggcttcgagtatcgacaccgaaaccgagcagacaatcggaggatgttatagacggaaaaccaatgaatcaaccgattctgcgatcctcacttagaactgaagcttcaggaagtcgtaccgaagaagcgacgcctgtaaaacaatccagagttacgttgagcccagaagttgagaagaagctcgccgagcaggatgaacggaaaagtgaacgtaggaaacattatgataagaatcctggacgatttgcgagaggttctgatcgaaaatcaaggataactgatgctcttttggatgctcgtgacagaatcgccgatcaactagaaagtcagaatccagcagaagagacgaaaagtcagatgattcgagtgaaaattgatcaaggtcccatgccaggaacgtcgcttgtcactttcccaccgattccagaaaaatcagaaaacgaaaagcagttgggaatagaggtgaatgcagtatttgatgaatcatctgaactaccgggaacatcagaacctactaaacttagttctgttcaaattatgaagatcgaagatggtggtcgaattgcaaaagatggacggatacgagttggtgattgtattgttgcaatagatggaaaacccgttgatcagatgtccattattcgagtacgtgcttcaatctcagatcttgcggcggtcacttcacgtccagttactttgattatcaatcgatcattggaatcatttcttgagcaggaatcgtcggctaagccaattcaatcggctctacaacaggcgaatactcaatatatcgggcatacgacagttgttgaattgataaagagctctaatggatttggcttcactgtgaccggacgtgaaactgcaaaaggagaacgtctattctacattggtaccgttaaaccgtacggagttgctctcggtcatctaaaatctggagacagacttctagagatcaatggaaccccgacgggacagtggacgcaatccgagattgtggaaaagttgaaagagacgatggtcggtgagaagataaagtttctcgtgtcgagagtctctcaaagtgctataatgagcacgtctgcttcatctgagaataaggaaaatgaggagacactgaaagttgttgaagaggagaagattccacagaagcttccgttaccggctcttatgacacctccagtaccaaaagatactccagctctgtcaccttccggagcatcacgatttgagattgtgattccattcatcaacggatcaagttccgcagggctcggagttagtctgaaggctcgagtatcgaaaaaatcaaatggatcaaaagtggattgtggaatctttatcaagaatgtgatgcatggaggtgctgcattcaaagaaggaggtctacgagttgatgatcgaattgttggagttgaggatatcgatttggagccactggacaatcgggaagctcaggcggcgttggctaagaaattaaaagaagttggaatgattagctcaaatgtgagactgacgattagcagatacaatgaatgtaatcctggacaaatctcaagggatttatcaagaattactgtggatgcttcatcaccatcaccttcatctcgaatgtcttcgcatacagctccagattctttacttccatcaccagcaactcgtggaacatcgtctagtggagcagattcttctcactcgaggcaatcgtccgcttcatcagctgttccagcagtgcctgcaagactaactgaaagggattcgattgtttcagacggaacaagtcggaatgatgaatcagaacttcctgattcggctgatccgtttaatcgggaaggtctcggaaggaaaagtctcagtgaaaaaagaggaatgggagcagctgctgatccacagcacatcaaattgttccaagatatcaaacatcagagacagaatagtgctccgacgtcttcaactcaaaaacgaagcaaatctcaacctcgatcttcgtcacaacggaactaccgtagtcccatgaagcttgtagatcttccgacaactgctgcggcttctgcttctacgaattctcagaatctcgacgactctgatatgctgaatcgccgttctcagagcatggaaagtataaatcggccagtggagagcattctccgtggaacggggcaaattccaacaggatcatcttcaaaagttcaatttatgcaagcagcgagtcctgatcaacatccatttccacctggagccgcattgcttagattgaagaatgaagagagtcgatcaagagataaatcaagaagaaagagtatgggaaatgcgatgcgaaacttctttggattcggaagcaaatcaagagatgcatcaccagaaaaaacaccgactgaatcagttcaattaagatctgtagaacgacctaaatcaataattgatgaaagaaataatggatcatctgaacgtgctccacctcctctaccaccacatcaatcacaacgacgtggaagtggtggaaatgtatttgtagattatggtgaaccatatggactcattccacagtatccccataatacgacttccggatatgagtcgtacgccgactctgagctctacgatcgatacgcggcccatcgctatcacccgcgtgggggcccaatcatcgatgaagacgaatacatttacagacaacagagtaccagcggtaattcaccgatcaacacgtcgtcctatgtcaactatggattaccagcatctaatgcgtaccatgtcggttcccgaataccaccacaaacctccagtggaagtatctcgaaaaccagtggagcgatgcgtcgtgtctatcccgccgaatacgatgaagacgtcgcctaccatcaacaaattccccaacaatcaacgagatatcaacagggtagcggtagtggacgtggtaacgccgactaccatcacatgttcaactcgtggttcgcgtacactggcggtggagcagtcggcgccgctccggtcatcaagtcctcgtacggatcatcgccggtacggatcgcagccgcttcggccatcgaacgaggcgaatcgttcgtcgtcgagcccgtcagtggttcgtcggcctcggccactgaccgtcggggacggagcacttcgagtggagccgttgcctctggatcatcatcaactgggttccaatatgccgcgaaggagaagtatgcggatgctcgatctggaaaattcaatggtggatcgacccgactctttattccaagacacggcggtgggctcagcgcggctgcgtttgcaacaaacttcgggggagaagcctacgagacacgtggtggaggagccggcggctcgccgagccaataccgtcgcagagatcagggaccgcctcatcgttttccccagtactagattttcaatagctgcctcatca | ||||
atggagaataagccacctgtaatcaaccttccagagaaggaaactgtgaatactccacagaagggaggaaaatttactattaacgatttcgagatcggaagaccactgggaaaaggaaaattcggcagtgtttacctggctcgcacaaaaactggacatttccatgtagcgatcaaggttctattcaaatcgcaactcatctcaggaggcgtcgagcatcaattggagcgtgaaattgagattcaatctcatttgaatcacccgaatattatcaagctctacacatatttttgggatgcgaagaagatctatctcgttttggaatatgcccccggaggcgaaatgtacaagcaattgacagtgagcaagagattctcagagccaacagctgcaaaatatatgtatgagatcgcagatgctttgtcatattgccacaggaaaaatgtgattcatcgcgacattaaaccggagaatttgcttatcggatcacaaggagaattgaaaattggagattttggatggagtgttcatgctccttcgaataagcgccaaacaatgtgcggaacaatggactatctccctcctgaaatggtgaatggagccgatcacagtgacgcagttgacttatgggcaatcggcgttctctgctatgagtttctcgttggaaaacccccattcgagcacgaagatcagtccaagacatatgcggcaatcaaagcggcacggtttacttaccctgattctgtgaagaagggtgcacgagatttgattggaagattgcttgtcgttgatcccaaggctcgctgtacgcttgaacaggtgaaggaacactactggatccagggaatgatggaggcaaaaattagagctgagaagcagcaaaagattgaaaaagaagcaagtcttcggaatcactga | ||||||
Experiment | Laboratory | WH | ||||
Date | 15 Mar 2007 00:00:00 | |||||
Strain | WBStrain00000001 | |||||
Treatment | L4 hermaphrodites were allowed to feed on RNAi bacteria for 24 hours before analysis. For double RNAi experiments bacteria cultures were separately grown overnight and then mixed in equal volumes before seeding. | |||||
Delivered_by | Bacterial_feeding | |||||
Inhibits | Predicted_gene (14) | |||||
Gene | WBGene00003918 | Inferred_automatically | RNAi_primary | |||
WBGene00000099 | Inferred_automatically | RNAi_primary | ||||
Transcript (18) | ||||||
Species | Caenorhabditis elegans | |||||
Interaction | WBInteraction000500953 | |||||
Reference | WBPaper00029322 | |||||
Phenotype | WBPhenotype:0001885 | Remark | par-3(RNAi);air-2(RNAi) embryos were unable to initiate furrow ingression | |||
Penetrance | Range | 64 | ||||
EQ_annotations | Life_stage | WBls:0000003 | PATO:0000460 | |||
Remark | Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation. | |||||
Method | RNAi |