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WormBase Tree Display for Sequence: Y37D8A

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Name Class

Y37D8ADNAY37D8A133099
SMapS_childGene_child (27)
CDS_child (683)
Transcript (40)
TransposonWBTransposon000000394986248252
WBTransposon000005317853178381
Genomic_non_canonicalWRM068cA024052566097
WRM0613dH081202644593
WRM0615bF053989067967
WRM0619dH03845039860
Nongenomicyk215b12034722031
yk271b32172821954
yk372f55813358813
yk387h9128608132548
[cgc5292]:mrg-15436657742
PCR_product (144)
AlleleWBVar02036491124029124030
WBVar0087146668566856
WBVar00872202106433106433
WBVar004124683373833738
WBVar00412652110016110016
WBVar01793695105452105452
WBVar008716503058730587
WBVar008720188393483934
WBVar008718345603556035
WBVar00412653110574110574
WBVar002401354825348252
WBVar01793696105455105455
WBVar008718355623156231
WBVar020882119425594294
WBVar008716513060930609
WBVar00872203106589106589
WBVar0087146769046904
WBVar008720198399083990
WBVar002199282216322163
WBVar004124693375333753
WBVar02036492124268124269
WBVar020882129453494544
WBVar00872204106646106646
WBVar008716523123531235
WBVar00412654110806110806
WBVar004124703384433844
WBVar0087146869346934
WBVar01793697105790105790
WBVar02036493124336124336
WBVar008718365660256602
WBVar008720208411684116
WBVar01793699107623107623
WBVar02036494124545124545
WBVar020882139553995543
WBVar002199302429024290
WBVar00251544131325131602
WBVar008716533125031250
WBVar004124713397833978
WBVar00872205106715106715
WBVar0087146969436943
WBVar008718375662056620
WBVar008720218413584135
WBVar00412655111136111136
WBVar02036495126323126338
WBVar008718385693256932
WBVar00872206106818106818
WBVar008720228413984139
WBVar004124723437134371
WBVar0087147073557355
WBVar00412656111462111462
WBVar020882149609096136
WBVar00182184890890
WBVar01793700107844107844
WBVar008716543125131251
WBVar008716553142031420
WBVar020882159641296417
WBVar01793701107872107872
WBVar002343147240272402
WBVar0018218618201820
WBVar00872207106909106909
WBVar008720238414984149
WBVar0087147173677367
WBVar008718395699356993
WBVar02036496127247127248
WBVar00412657111622111622
WBVar004124733458134581
WBVar00412658111935111935
WBVar008720248421684216
WBVar008718405721257212
WBVar0087147273727372
WBVar0018218725912591
WBVar01793702108855108855
WBVar004124743503735037
WBVar02036497132302132303
WBVar002701616023560235
WBVar020882169683096831
WBVar008716563147731477
WBVar00872208107142107142
WBVar004124753571835718
WBVar0018218828332833
WBVar008720258429484294
WBVar020882179791997926
WBVar008716573158931589
WBVar00872209107266107266
WBVar01793703111816111816
WBVar00412659112164112164
WBVar002199374728147281
WBVar0087147374047404
WBVar002343169951399513
WBVar008718415727057270
WBVar002701636418764187
WBVar002701656461464614
WBVar014928992304223042
WBVar0087147474257425
WBVar00872210107319107319
WBVar008718425732357323
WBVar02088218103107103129
WBVar0018218941504150
WBVar004124763590335903
WBVar002574494619346194
WBVar008716583176031760
WBVar008720268442084420
WBVar01793704112126112126
WBVar020819623621236220
WBVar00412660112552112552
WBVar01793705112257112257
WBVar008716593189531895
WBVar004124773676636766
WBVar008720278445584455
WBVar008718435750357503
WBVar02081963114744114745
WBVar00412661113160113160
WBVar02088219103639103647
WBVar0087147578887888
WBVar002701666654966549
WBVar0018219041514151
WBVar00872211107328107328
WBVar02088220122447122448
WBVar000000206742067420
WBVar008720288451984519
WBVar0087147679067906
WBVar0018219174537453
WBVar008716603192331923
WBVar00872212107745107745
WBVar01793706112515112515
WBVar00412662113416113416
WBVar004124783706137061
WBVar008718445757557575
WBVar00412663113702113702
WBVar000925085512956571
WBVar019904894994349944
WBVar008720298452784527
WBVar004124793714637146
WBVar01793707112628112628
WBVar008718455779457794
WBVar02088221123308123310
WBVar0018219279547954
WBVar00872213107748107748
WBVar0087147779147914
WBVar008716613198131981
WBVar008718465823558235
WBVar00412664113757113757
WBVar008720308467484674
WBVar01793708114183114183
WBVar00872214108459108459
WBVar0087147880158015
WBVar004124803736837368
WBVar02088222125118125120
WBVar019904908551285513
WBVar0018219384578457
WBVar008716623203132031
WBVar021329761154411544
WBVar008718475831158311
WBVar019904919328793287
WBVar008720318522885228
WBVar0018219489348934
WBVar01793709115063115063
WBVar021329771940219402
WBVar008716633205232052
WBVar002199457615476154
WBVar0087147980908090
WBVar00412665114353114353
WBVar00872215108521108521
WBVar002594789255092551
WBVar004124813789937899
WBVar0087148083028302
WBVar021329782860428604
WBVar00412666115210115210
WBVar00872216108573108573
WBVar0014602835723877
WBVar008720328524885248
WBVar008716643256232562
WBVar0018219597599759
WBVar008718485846258462
WBVar01990492103636103636
WBVar004124824022640226
WBVar01793710115399115399
WBVar001821961008410084
WBVar0087148183698369
WBVar004124834023040230
WBVar008720338531185311
WBVar01793711115410115410
WBVar008718495875458754
WBVar00412667115222115222
WBVar008716653268932689
WBVar01990493108410108411
WBVar00872217108576108576
WBVar021329793933439334
WBVar008716663271932719
WBVar001821971111811118
WBVar01990494110532110532
WBVar00412668115297115297
WBVar008718505880058800
WBVar021228231912919288
WBVar008720348559785597
WBVar00872218108591108591
WBVar01793712115417115417
WBVar004124844066040660
WBVar0087148284688468
WBVar021329804504045040
WBVar00872219108819108819
WBVar01793713115432115432
WBVar004124854127541275
WBVar0087148384928492
WBVar001821981196911969
WBVar008720358565785657
WBVar021329815126351263
WBVar002199507958479584
WBVar008716673291532915
WBVar00412669115405115405
WBVar008718515880158801
WBVar021329825305453054
WBVar008718525906459064
WBVar004124864202242022
WBVar00412670115871115871
WBVar01793714115631115631
WBVar0087148485668566
WBVar008720368580585805
WBVar00872220108861108861
WBVar001821991244212442
WBVar008716683305433054
WBVar008718535912159121
WBVar001822001281412814
WBVar004124874339743397
WBVar00872221108904108904
WBVar008720378624186241
WBVar008716693331733317
WBVar021329835691356913
WBVar02075656104261104426
WBVar00412671116242116242
WBVar0087148587728772
WBVar01793715115711115711
WBVar021329847089670896
WBVar0087148687978797
WBVar01793716115939115939
WBVar001822011383213832
WBVar00872222108972108972
WBVar014923596743667436
WBVar00412672116589116589
WBVar008716703334733347
WBVar008718545913859138
WBVar008720388631186311
WBVar004124884534545345
WBVar014923608456484564
WBVar01793717116784116784
WBVar008718555914359143
WBVar0087148790009000
WBVar001822021414214142
WBVar008716713348133481
WBVar004124894550945509
WBVar021329858303483034
WBVar008720398634086340
WBVar00412673117242117242
WBVar00872223109001109001
WBVar008720408668686686
WBVar00412674117310117310
WBVar00872224109214109214
WBVar021329868625786257
WBVar008718565924359243
WBVar008716723349333493
WBVar004124904749647496
WBVar0087148890349034
WBVar01492361126748126748
WBVar01793718118497118497
WBVar001822031452314523
WBVar008716733359733597
WBVar00872225109288109288
WBVar004124914780147801
WBVar001822041564015640
WBVar008718575947259472
WBVar008720418706887068
WBVar00412675117484117484
WBVar0087148994969496
WBVar01793719119914119914
WBVar015683011868218682
WBVar021329879565395653
WBVar0087149097759775
WBVar01793721121469121469
WBVar004124924787147871
WBVar015683022001420014
WBVar021070035227252301
WBVar00412676117862117862
WBVar008720428706987069
WBVar02132988104629104629
WBVar00872226109371109371
WBVar001822051661916619
WBVar008716743367133671
WBVar008718585948959489
WBVar02132989120740120740
WBVar015683032314623146
WBVar0087149198969896
WBVar01793722122008122008
WBVar001822061672716727
WBVar008718595949359493
WBVar008716753391933919
WBVar004124934805848058
WBVar00872227109410109410
WBVar00412677118452118452
WBVar008720438724987249
WBVar00872228109946109946
WBVar02146376131205131205
WBVar02132990121039121039
WBVar006025261259612596
WBVar01793723122625122625
WBVar015683046370763707
WBVar008714921001510015
WBVar008716763408034080
WBVar004124944808448084
WBVar008720448733587335
WBVar008718605958159581
WBVar00412678119253119253
WBVar001822071695116951
WBVar01793724122791122791
WBVar015683056399463994
WBVar008718615959759597
WBVar008714931021610216
WBVar008716773409834098
WBVar00412679119546119546
WBVar004124954815048150
WBVar00219960115234115234
WBVar00872229109960109960
WBVar008720458785287852
WBVar02146377130983130983
WBVar02132991129796129796
WBVar001822081711517115
WBVar02132992130052130052
WBVar004124965098250982
WBVar001822101869418694
WBVar008720468790487904
WBVar008718625962759627
WBVar008716783412134121
WBVar002985288588685886
WBVar0150972450305030
WBVar014170635548455485
WBVar00219962115673115673
WBVar00412680120528120528
WBVar008714941021610216
WBVar00872230110597110597
WBVar02146378126927126927
WBVar01793725122841122841
WBVar00601260132564132564
WBVar02152556120917121012
WBVar015683068581685816
WBVar008714951038610386
WBVar00412681120547120547
WBVar01793726122950122950
WBVar008718635964759647
WBVar014170646397063971
WBVar00872231110899110899
WBVar015683078665586655
WBVar02146379131208131208
WBVar00219963115868115868
WBVar0150972587098709
WBVar004124975099250992
WBVar008720478808188081
WBVar001822111998519985
WBVar008716793418734187
WBVar020795828432584491
WBVar00600864119455119749
WBVar004124985102951029
WBVar01793727123011123011
WBVar00251571131271131542
WBVar008714961044710447
WBVar02146380131213131213
WBVar015097261022510225
WBVar00412682120567120567
WBVar014170657870978710
WBVar008718645981459814
WBVar001822132055820558
WBVar008716803429534295
WBVar015683089003290032
WBVar0196397924892489
WBVar00872232110924110924
WBVar008720488812188121
WBVar008718655983559835
WBVar008714971070810708
WBVar0196398061726173
WBVar015683099003390033
WBVar002776412163021630
WBVar008720498815888158
WBVar015097271098410984
WBVar004124995159251592
WBVar0183288168126812
WBVar01793728123056123056
WBVar00872233110974110974
WBVar02146381131424131424
WBVar00412683120804120804
WBVar001822142249522495
WBVar008716813434134341
WBVar02146382132496132496
WBVar018468152695526955
WBVar0183288268136813
WBVar004125005216052160
WBVar00872234111098111098
WBVar015683109004290042
WBVar008716823463134631
WBVar008720508822388223
WBVar015097282239722397
WBVar001822152311023110
WBVar008714981074010740
WBVar0196398176787678
WBVar014170678068780688
WBVar01793729123113123113
WBVar008718665990459904
WBVar00412684121053121053
WBVar002776424617746177
WBVar01793730123392123392
WBVar008716833464134641
WBVar004125015217852178
WBVar014170688770987710
WBVar002776434683546835
WBVar00412685121120121120
WBVar015097303096530965
WBVar008720518866788667
WBVar02146383131492131492
WBVar0183288368146814
WBVar015683119015390153
WBVar008714991080810808
WBVar001822162311223112
WBVar0196398295339533
WBVar00872235111515111515
WBVar008718675995859958
WBVar008720528876488764
WBVar019639831340813408
WBVar015683129015490154
WBVar001822172431724317
WBVar018328841064110641
WBVar00872236111656111656
WBVar008718685996559965
WBVar008716843465634656
WBVar015097313177031770
WBVar014170699014690147
WBVar0204894810501052
WBVar004125025334053340
WBVar008715001148411484
WBVar00412686121459121459
WBVar002776447055670556
WBVar01793731124147124147
WBVar0206765912491252
WBVar00412687121875121875
WBVar002776457484474844
WBVar008715011180411804
WBVar014170709181791818
WBVar004125035396153961
WBVar00872237112180112180
WBVar008720538908689086
WBVar001822182437124371
WBVar015683139121291212
WBVar01793732125103125103
WBVar008716853499134991
WBVar008718695996659966
WBVar019639841428314283
WBVar018328851066210662
WBVar015097323458534585
WBVar00872238112433112433
WBVar018328861095910959
WBVar008720548908989089
WBVar00412688122380122380
WBVar001822192448024480
WBVar015683149310393103
WBVar008716863537835378
WBVar008718705996759967
WBVar015097333480034800
WBVar019639851543115440
WBVar004125045461554615
WBVar002776468747687476
WBVar020676606785967893
WBVar008715021181411814
WBVar014170719202092021
WBVar01793733125341125341
WBVar0207660735433861
WBVar003185658025780257
WBVar002776479782797827
WBVar019639861832918329
WBVar01793734126040126040
WBVar014170729380493805
WBVar015683159325393253
WBVar004125055466254662
WBVar008715031182511825
WBVar018328871421114211
WBVar001822202483824838
WBVar00412689124122124122
WBVar020676619429394294
WBVar00872239112593112593
WBVar015097343613236132
WBVar008720558942089420
WBVar008716873570735707
WBVar008718715997259972
WBVar01793735126160126160
WBVar020676629745597456
WBVar001822212484024840
WBVar00412690124159124159
WBVar008716883597535975
WBVar008718726000160001
WBVar008715041189511895
WBVar008720568945289452
WBVar00277648108590108590
WBVar019639871931119312
WBVar00872240112784112784
WBVar015097353849038490
WBVar015683169402594025
WBVar017101931813318133
WBVar014170739425494255
WBVar018328881652216522
WBVar004125065488854888
WBVar008720578951989519
WBVar019639881940319404
WBVar014170749554095541
WBVar017101946564565645
WBVar00872241112807112807
WBVar015683179404694046
WBVar001822222491924919
WBVar008716893609036090
WBVar015097374747947479
WBVar008718736015260152
WBVar004125075545255452
WBVar018328891968119681
WBVar00412691124912124912
WBVar01793736126264126264
WBVar008715051196511965
WBVar00277649120391120391
WBVar00242486131299131299
WBVar015097384804348043
WBVar008718746015260152
WBVar001822232656626566
WBVar008720588967089670
WBVar01793737126449126449
WBVar004125085587155871
WBVar018328902077720777
WBVar00412692124935124935
WBVar019639891957219572
WBVar008715061202012020
WBVar00872242112873112873
WBVar014170759641796418
WBVar015683189406294062
WBVar008716903621336213
WBVar014170769695296953
WBVar008715071205312053
WBVar015097397783177831
WBVar00872243113139113139
WBVar008716913639236392
WBVar001822242699626996
WBVar004125095587455874
WBVar008718756037460374
WBVar00412693125432125432
WBVar008720598983089830
WBVar015683199407794077
WBVar018328912696926969
WBVar01793738126718126718
WBVar019639902021620217
WBVar008718766074860748
WBVar015683209425694256
WBVar008715081205612056
WBVar01793739126755126755
WBVar004125105692356923
WBVar018328922962229622
WBVar019639912155121552
WBVar00412694125482125482
WBVar00872244113283113283
WBVar015097407832478324
WBVar008720608985289852
WBVar001822252713327133
WBVar01667583107880107880
WBVar008716923640736407
WBVar00412695125559125559
WBVar015097418635386353
WBVar00872245113372113372
WBVar008720618985289852
WBVar01667584108204108204
WBVar014170789708297083
WBVar001822262728527285
WBVar008718776087160871
WBVar019639922216822168
WBVar008716933644536445
WBVar008715091206612066
WBVar01793741127101127101
WBVar018328932989929899
WBVar015683219441994419
WBVar004125115694556945
WBVar0133877644164416
WBVar008716943657936579
WBVar019639932238922390
WBVar01509742114756114756
WBVar008720628987889878
WBVar01793742127229127229
WBVar004125125813858138
WBVar015683229442294422
WBVar013387821713217132
WBVar008715101207112071
WBVar018328943030930309
WBVar00412696125589125589
WBVar008718786111861118
WBVar00872246113452113452
WBVar01417079102464102465
WBVar01667585108214108214
WBVar001822272824428244
WBVar01793743128142128142
WBVar018328953515835158
WBVar00872247113961113961
WBVar008715111216212162
WBVar008718796120461204
WBVar004125135874158741
WBVar00412697126050126050
WBVar019639942310123119
WBVar000881647268972520
WBVar008716953692336923
WBVar01417080103879103880
WBVar01667586108217108217
WBVar008720639005990059
WBVar001822282947329473
WBVar015683239442794427
WBVar017858215189351893
WBVar001822292968929689
WBVar017858227373473734
WBVar008716963741137411
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Oligo_set (19)
Feature_object (1260)
Feature_dataY37D8A:Polysome1133099
Y37D8A:TranscriptionallyActiveRegion1133099
Y37D8A:ChIPSeqTF1133099
Y37D8A:TRF1133099
Y37D8A:Dust1133099
Y37D8A:inverted1133099
Homol_data (21)
StructureFromSourceCHROMOSOME_III
Overlap_rightY39E4A132994
Overlap_leftBE10
Clone_left_endY39E4132994
Y37D8A1
Clone_right_endBE10104
Y37D8A133099
DB_infoDatabaseEMBLNDB_ACAL032626
NDB_SVAL032626.2
Secondary_accessionZ92819
DB_remark[060419 pad] Sequence updated to reflect 357 bp of genomic sequence that was never submitted to embl of incorporated in the released assembly.
KeywordHTG
EMBL_dump_infoEMBL_dump_methodworm_EMBL-dump
OriginFrom_authorBarlow K
From_laboratoryHX
Date_directory981030
SpeciesCaenorhabditis elegans
StrainWBStrain00000001
VisibleCloneY37D8A
RemarkTransposon Y37D8A.24 converted into an S_Child [020208 kj]
PropertiesGenomic_canonical
ChecksumMD56767224e0f9b7ef9f8ca43e22e248cec
StatusFinished30 Oct 1998 00:00:00
Submitted29 Oct 1998 00:00:00
Annotated01 Jan 1980 00:00:00
MapSequence-III
Interpolated_map_positionIII19.2637
Assembly_tagsFinished Left14Y37D8A
Clone right end101104BE10
annotation131122131124
First select a Feature -
[ ] Unsure
[X] Misc_feature
Then select the text for the note(s) -
[ ] Tandem repeat
[ ] Single clone region
[ ] Forced join
[X] Other
Add a comment here -
The overlapping clone Y111B2 reads GGG at this point.
5620156974First select a Feature -[ ] Unsure[X] Misc_featureThen select the text for the note(s) -[ ] Tandem repeat[ ] Single clone region[ ] Forced join[X] OtherAdd a comment here -Dispersed IR-2 inverted repeat similar to sequence U86947. Repeat is flanked by a tandem duplication of the sequence GTACT.
8629387083First select a Feature -[ ] Unsure[X] Misc_featureThen select the text for the note(s) -[ ] Tandem repeat[ ] Single clone region[ ] Forced join[X] OtherAdd a comment here -Dispersed IR-2 inverted repeat similar to sequence U86947. Repeat is flanked by a tandem duplication of the sequence ACATT.
106343107171First select a Feature -[ ] Unsure[X] Misc_featureThen select the text for the note(s) -[ ] Tandem repeat[ ] Single clone region[ ] Forced join[X] OtherAdd a comment here -Dispersed IR-2 inverted repeat similar to sequence U86947. This copy of the repeat does not have a flanking duplicated sequence.This copy also contains a region which is covered only by one subclone.
116311116808First select a Feature -[ ] Unsure[X] Misc_featureThen select the text for the note(s) -[ ] Tandem repeat[ ] Single clone region[ ] Forced join[X] OtherAdd a comment here -Dispersed IR-2 inverted repeat similar to sequence U86947. In this copy the arms are shorter by approximately bp also there is no flanking duplication of sequence. The sequence which gives rise to the shortened version of this repeat is derived from subclones from two yac clones.
Finished Right133094133099Y37D8A
Clone left end132999132994Y39E4
MethodGenomic_canonical