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WormBase Tree Display for Variation: WBVar00182288

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Name Class

WBVar00182288NamePublic_nameWBVar00182288
Other_namehaw49564
haw147804
cewivar00153849
Y37D8A.19.1:c.55-21A>T
Y37D8A.21.1:c.389+357T>A
HGVSgCHROMOSOME_III:g.12931071A>T
Sequence_detailsSMapS_parentSequenceY37D8A
Flanking_sequencestttcattataaaattcaaaaaaaaatcaattttgtttcttttcagatcat
Mapping_targetY37D8A
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004600From_analysisMillion_mutation_project_reanalysis
WBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00022850From_analysisWGS_De_Bono
Million_mutation_project_reanalysis
WBStrain00022899From_analysisMillion_mutation_project_reanalysis
WBStrain00023286From_analysisMillion_mutation_project_reanalysis
WBStrain00023665From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00567669
WBVar01338962
StatusLive
AffectsGeneWBGene00012558
WBGene00012557
TranscriptY37D8A.21.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY37D8A.21.1:c.389+357T>A
Intron_number3/5
Y37D8A.19.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY37D8A.19.1:c.55-21A>T
Intron_number2/4
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw49564
MethodWGS_Hawaiian_Waterston