WormBase Tree Display for Sequence: D2007

D2007 DNA: D2007 13650
  SMap: S_child: Gene_child: WBGene00017042 4226 9891
        WBGene00195783 1478 1584
        WBGene00017045 13453 11210
        WBGene00017044 278 1237
        WBGene00017041 10729 11343
      CDS_child: D2007.1 10736 11205
        D2007.2a 7731 9773
        D2007.2b 4237 9773
        D2007.2c 8079 9773
        D2007.2d 9021 9773
        D2007.3:wp254 4237 4395
        D2007.4 281 1118
        D2007.5 13431 11339
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g66n11_x17_III_p 10736 11202
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g31n11_x17_III_p 281 1115
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g62n11_x17_III_m 13431 11342
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g182_x17_III_p 4357 7845
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g143n11_x17_III_p 7731 9770
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g67n11_x17_III_p 7731 7845
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g19n11_x17_III_p 281 1115
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g53n11_x17_III_m 13431 11342
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_gD2007.3 4237 4392
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g137_x17_III_p 10977 11209
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g153_x17_III_p 4237 9770
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g57n11_x17_III_p 10736 11199
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g54n11_x17_III_m 13431 11342
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g244_x17_III_p 7731 9770
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g32n11_x17_III_p 281 1115
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g120_x17_III_m 12389 12191
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g137_x17_III_m 11708 11497
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g74_x17_III_p 7731 9770
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g23n11_x17_III_p 10736 11202
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g18n11_x17_III_p 281 1115
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g65_x17_III_m 12169 11739
        RNASEQ_embryo_him-8_20dC_post-L1_g92n11_x17_III_m 13431 11342
        RNASEQ_embryo_him-8_20dC_post-L1_g139_x17_III_p 8859 9626
        RNASEQ_embryo_him-8_20dC_post-L1_g123_x17_III_p 10977 11140
        RNASEQ_embryo_him-8_20dC_post-L1_g36n11_x17_III_p 281 1115
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g9n11_x17_III_p 10736 11202
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g107n11_x17_III_p 7731 9770
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g50n11_x17_III_p 281 1115
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g65n11_x17_III_m 13431 11342
        RNASEQ_L4_soma_JK1107_no_DNaseI_g103n11_x17_III_p 9021 9770
        RNASEQ_L4_soma_JK1107_no_DNaseI_g32n11_x17_III_p 10736 11202
        RNASEQ_L4_soma_JK1107_no_DNaseI_g113n11_x17_III_p 8079 9080
        RNASEQ_L4_soma_JK1107_no_DNaseI_g260_x17_III_p 4357 8125
        RNASEQ_L4_soma_JK1107_no_DNaseI_gD2007.3 4237 4392
        RNASEQ_L4_soma_JK1107_no_DNaseI_g71n11_x17_III_m 13431 11342
        RNASEQ_L4_soma_JK1107_no_DNaseI_g56n11_x17_III_p 7731 7845
        RNASEQ_L4_soma_JK1107_no_DNaseI_g36n11_x17_III_p 281 1115
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g148_x17_III_p 8983 9080
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_gD2007.3 4237 4392
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g10n11_x17_III_p 10736 11202
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g138e5k79_x17_III_p 7731 9146
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g48n11_x17_III_m 13431 11342
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g131n11_x17_III_p 9021 9770
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g40n11_x17_III_p 281 1115
        RNASEQ_early_embryo_g166_x17_III_p 10977 11203
        RNASEQ_early_embryo_g136_x17_III_p 8859 9770
        RNASEQ_early_embryo_g78n11_x17_III_p 281 1115
        RNASEQ_early_embryo_g212_x17_III_p 7731 7832
        RNASEQ_early_embryo_g48n11_x17_III_m 13431 11342
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g45n11_x17_III_m 13431 11342
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g190_x17_III_p 4367 7755
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g125_x17_III_p 8079 9770
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g72n11_x17_III_p 281 1115
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g131_x17t1_III_p 10977 11188
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_gD2007.3 4237 4392
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g39n11_x17_III_m 13431 11342
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g27n11_x17_III_p 281 1115
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g53n11_x17_III_p 10736 11202
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g149_x17_III_p 8079 9770
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g150n11_x17_III_p 7731 7844
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g58n11_x17_III_p 10736 11202
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g54n11_x17_III_m 13431 11342
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g66n11_x17_III_p 281 1115
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g101n11_x17_III_p 7731 9770
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g70n11_x17_III_m 13431 11342
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g234_x17_III_p 4367 7776
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g54n11_x17_III_p 281 1115
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g41n11_x17_III_p 10736 11202
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g140_x17_III_p 7839 9770
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g129_x17_III_p 10977 11203
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g174_x17_III_p 8079 9077
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g47n11_x17_III_m 13431 11342
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g45n11_x17_III_p 281 1115
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g66n11_x17_III_m 13431 11342
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g204_x17_III_p 8983 9014
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g120n11_x17_III_p 7731 9017
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g56n11_x17_III_p 10736 11202
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g137_x17_III_p 9723 9770
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g29n11_x17_III_p 281 1115
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g119n11_x17_III_p 7731 9665
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g176_x17_III_p 4357 7845
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g96n11_x17_III_m 13431 12504
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g85n11_x17_III_p 10977 11248
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g31n11_x17_III_p 281 1115
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g98_x17_III_m 12476 11342
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_gD2007.3 4237 4392
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g66n11_x17_III_m 13431 11497
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g182_x17_III_p 4357 7845
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g24n11m2_x17_III_p 10926 11056
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g24n11_x17_III_p 10736 11202
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g114n11_x17_III_p 7731 9080
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g104n11_x17_III_p 9021 9770
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g27n11_x17_III_p 281 1115
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g113n11_x17_III_m 11547 11342
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g86n11_x17_III_m 13431 11342
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g205_x17_III_p 4357 7845
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g124n11e3k56_x17_III_p 8747 8885
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g25n11_x17_III_p 10736 11202
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g22n11_x17_III_p 281 1115
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g122n11_x17_III_p 9021 9770
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g124n11_x17_III_p 7731 9080
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g176_x17_III_p 8859 9770
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g71n11_x17t1_III_p 10736 11187
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g49n11_x17_III_m 13431 11342
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g62n11_x17_III_p 281 1115
        D2007.gc1 281 1118
        D2007.gc2 4237 9773
        D2007.gc3 13453 11339
        ContigIII.elegans.jigsaw.1589.mRNA1589 4125 9882
        ContigIII.elegans.jigsaw.1588.mRNA1588 246 3097
        ContigIII.elegans.jigsaw.1590.mRNA1590 10675 11861
        ContigIII.elegans.jigsaw.1591.mRNA1591 13504 11207
        AG1201_D2007.4.T5 281 1013
        AG1201_D2007.4.T1 281 1118
        gD2007.3.Ts1 4237 4395
        AG1201_D2007.3.T1 4237 9773
        AG1201_D2007.3.T3 8859 9773
        AG1201_D2007.3.T2 9021 9773
        AG1201_RIT3M.225.T1 9481 9226
        AG1201_D2007.1.T2 10736 11035
        AG1201_D2007.1.T1 10736 11205
        AG1201_D2007.1.T3 10736 11205
        AG1201_D2007.5.T1 13431 11339
        AG1201_RIT3P.704.T1 11683 11940
      Transcript: D2007.6 1478 1584
        D2007.1.1 10729 11343
        D2007.2a.1 4226 9891
        D2007.2a.2 4230 9884
        D2007.2a.3 7698 9884
        D2007.2b.1 4237 9773
        D2007.2c.1 8079 9773
        D2007.2d.1 9021 9773
        D2007.4.1 278 1237
        D2007.5.1 13453 11210
      PCR_product: TH:305F10 11361 13501
        TH:309G12 3829 4435
        TH:309H12 277 1578
        TH:310G3 10407 11202
        TH:330E6 8934 10573
        cenix:305-f10 11357 13505
        cenix:309-g12 3828 4436
        cenix:309-h12 276 1579
        cenix:310-g3 10406 11203
        cenix:330-e6 8933 10574
        mv_D2007.1 10737 11203
        mv_D2007.2 7732 9771
        mv_D2007.3 4238 4393
        mv_D2007.4 282 1116
        mv_D2007.5 11341 13430
        p_D2007.1_93 9772 10735
        p_D2007.2_93 5731 7730
        sjj_D2007.1 10325 11207
        sjj_D2007.2 7567 9757
        sjj_D2007.3 3819 4776
        sjj_D2007.4 318 1429
        sjj_D2007.5 11533 12681
      Allele (185)
      Oligo_set: Aff_D2007.1 10737 11203
        Aff_D2007.2 7732 9771
        Aff_D2007.3 4238 4393
        Aff_D2007.4 281 1115
        Aff_D2007.5 12164 11343
      Feature_object (127)
      Feature_data: D2007:Polysome 1 13650
        D2007:TranscriptionallyActiveRegion 1 13650
        D2007:ChIPSeqTF 1 13650
        D2007:TRF 1 13650
        D2007:Dust 1 13650
        D2007:inverted 1 13650
      Homol_data (18)
  Structure: From: Source: CHROMOSOME_III
    Overlap_right: C50C3 13451
    Overlap_left: C14B9
  DB_info: Database: EMBL NDB_AC FO080532
        NDB_ID _L16560
        NDB_SV FO080532.2
    Secondary_accession: L16560
    DB_remark: The 5' clone is C14B9, 200 bp overlap; the 3' clone is C50C3, 200 bp overlap. Actual start of this clone is at base position 18605 of C14B9; actual end is at 7663 of C50C3.
      [121025] Sequence correction: SNP 0 bases @ 9856
      [121025] Sequence correction WBsf268604 : Deletion G-1 bases @ 2566
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Favello A
      Favello T
    From_laboratory: RW
    Date: 12 May 1993 00:00:00
    Species: Caenorhabditis elegans
  Visible: Clone: D2007
    Reference: WBPaper00015050
    Remark: ?Text
  Properties: Genomic_canonical
    Checksum: MD5: 566caee6547676d555351b95d81906dc
    Status: Finished
      Submitted: 12 May 1993 00:00:00
  Map: Sequence-III
  Interpolated_map_position: III -0.375565
  Method: Genomic_canonical