WormBase Tree Display for Sequence: F57C7
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| F57C7 | DNA | F57C7 | 30149 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child (13) | ||||
| CDS_child (334) | ||||||
| Transcript (20) | ||||||
| PCR_product (20) | ||||||
| Allele (432) | ||||||
| Oligo_set | Aff_F57C7.1A | 9306 | 10431 | |||
| Aff_F57C7.1B | 8890 | 9536 | ||||
| Aff_F57C7.2 | 14496 | 15917 | ||||
| Aff_F57C7.3 | 27827 | 25567 | ||||
| Aff_F57C7.4 | 21071 | 20339 | ||||
| Aff_F57C7.5 | 17686 | 16269 | ||||
| Feature_object | WBsf1006744 | 3834 | 3984 | |||
| WBsf1006745 | 5332 | 5380 | ||||
| WBsf1006746 | 6014 | 6164 | ||||
| WBsf1006747 | 6294 | 6444 | ||||
| WBsf1006748 | 12194 | 12234 | ||||
| WBsf1006749 | 24054 | 24204 | ||||
| WBsf1006750 | 24481 | 24524 | ||||
| WBsf1006751 | 26054 | 26204 | ||||
| WBsf1006752 | 27214 | 27266 | ||||
| WBsf1006753 | 28608 | 28664 | ||||
| WBsf1006754 | 28934 | 29084 | ||||
| WBsf1023731 | 3814 | 3964 | ||||
| WBsf1023732 | 6294 | 6444 | ||||
| WBsf1023733 | 26114 | 26264 | ||||
| WBsf1023734 | 28608 | 28664 | ||||
| WBsf1023735 | 28874 | 29024 | ||||
| WBsf000150 | 12171 | 12172 | ||||
| WBsf000192 | 28547 | 28546 | ||||
| WBsf006482 | 4484 | 4485 | ||||
| WBsf021312 | 15600 | 15601 | ||||
| WBsf111979 | 1961 | 1961 | ||||
| WBsf111980 | 10939 | 10939 | ||||
| WBsf111981 | 18100 | 18100 | ||||
| WBsf111982 | 19037 | 19037 | ||||
| WBsf111983 | 24987 | 24987 | ||||
| WBsf112690 | 10729 | 10729 | ||||
| WBsf112691 | 25381 | 25381 | ||||
| WBsf113362 | 10528 | 10528 | ||||
| WBsf113363 | 25119 | 25119 | ||||
| WBsf113742 | 24967 | 24967 | ||||
| WBsf114260 | 13161 | 13161 | ||||
| WBsf114261 | 25034 | 25034 | ||||
| WBsf114791 | 10815 | 10815 | ||||
| WBsf115311 | 1972 | 1972 | ||||
| WBsf115864 | 10730 | 10730 | ||||
| WBsf115865 | 15942 | 15942 | ||||
| WBsf115866 | 25109 | 25109 | ||||
| WBsf116979 | 10845 | 10845 | ||||
| WBsf116980 | 16007 | 16007 | ||||
| WBsf116981 | 25096 | 25096 | ||||
| WBsf132338 | 6919 | 6920 | ||||
| WBsf132615 | 4484 | 4485 | ||||
| WBsf204345 | 27323 | 27322 | ||||
| WBsf204718 | 25381 | 25381 | ||||
| WBsf205314 | 16266 | 16266 | ||||
| WBsf205315 | 24967 | 24967 | ||||
| WBsf205616 | 9774 | 9774 | ||||
| WBsf205618 | 15711 | 15711 | ||||
| WBsf205619 | 18100 | 18100 | ||||
| WBsf205620 | 19037 | 19037 | ||||
| WBsf205621 | 24987 | 24987 | ||||
| WBsf206104 | 25119 | 25119 | ||||
| WBsf206227 | 7196 | 7196 | ||||
| WBsf206228 | 9733 | 9733 | ||||
| WBsf206229 | 15708 | 15708 | ||||
| WBsf206230 | 25096 | 25096 | ||||
| WBsf206776 | 7198 | 7198 | ||||
| WBsf206777 | 12991 | 12991 | ||||
| WBsf206778 | 25034 | 25034 | ||||
| WBsf207645 | 5473 | 5473 | ||||
| WBsf207647 | 16178 | 16178 | ||||
| WBsf207648 | 25133 | 25133 | ||||
| WBsf208588 | 9808 | 9808 | ||||
| WBsf209418 | 10862 | 10862 | ||||
| WBsf209419 | 15696 | 15696 | ||||
| WBsf209420 | 16054 | 16054 | ||||
| WBsf210201 | 15695 | 15695 | ||||
| WBsf210202 | 25109 | 25109 | ||||
| WBsf210556 | 9752 | 9752 | ||||
| WBsf210557 | 10860 | 10860 | ||||
| WBsf210558 | 12620 | 12620 | ||||
| WBsf210559 | 25097 | 25097 | ||||
| WBsf211336 | 9751 | 9751 | ||||
| WBsf211622 | 28547 | 28546 | ||||
| WBsf211783 | 12171 | 12172 | ||||
| WBsf216531 | 16248 | 16249 | ||||
| WBsf236292 | 1738 | 1943 | ||||
| WBsf236293 | 9537 | 9852 | ||||
| WBsf236294 | 10432 | 10862 | ||||
| WBsf236295 | 10432 | 10929 | ||||
| WBsf236296 | 15949 | 15980 | ||||
| WBsf236297 | 15949 | 16250 | ||||
| WBsf237877 | 25566 | 25008 | ||||
| WBsf237878 | 25566 | 25059 | ||||
| WBsf237879 | 25566 | 25340 | ||||
| WBsf258571 | 1972 | 1973 | ||||
| WBsf258572 | 10989 | 10990 | ||||
| WBsf258573 | 9913 | 9914 | ||||
| WBsf258574 | 9852 | 9853 | ||||
| WBsf258575 | 9807 | 9808 | ||||
| WBsf258576 | 16282 | 16283 | ||||
| WBsf258577 | 15747 | 15748 | ||||
| WBsf258578 | 24990 | 24989 | ||||
| WBsf258579 | 25345 | 25344 | ||||
| WBsf259979 | 16210 | 16209 | ||||
| WBsf278690 | 1944 | 1945 | ||||
| WBsf279156 | 16253 | 16254 | ||||
| WBsf637093 | 12055 | 12056 | ||||
| WBsf637333 | 5597 | 5598 | ||||
| WBsf637518 | 16416 | 16417 | ||||
| WBsf637908 | 10930 | 10931 | ||||
| WBsf637921 | 16402 | 16403 | ||||
| WBsf638569 | 2338 | 2339 | ||||
| WBsf638743 | 16382 | 16383 | ||||
| WBsf639167 | 16353 | 16354 | ||||
| WBsf640164 | 25048 | 25047 | ||||
| WBsf640249 | 16233 | 16232 | ||||
| WBsf642505 | 16211 | 16212 | ||||
| WBsf642506 | 25373 | 25372 | ||||
| WBsf971721 | 14175 | 14176 | ||||
| WBsf971722 | 25743 | 25742 | ||||
| WBsf971723 | 27836 | 27835 | ||||
| WBsf971724 | 28075 | 28074 | ||||
| WBsf971725 | 28642 | 28641 | ||||
| WBsf971726 | 29557 | 29556 | ||||
| WBsf979363 | 1970 | 1971 | ||||
| WBsf979638 | 9853 | 9854 | ||||
| WBsf217050 | 3663 | 4318 | ||||
| WBsf977917 | 2490 | 4492 | ||||
| WBsf038109 | 3334 | 5932 | ||||
| WBsf038110 | 7134 | 9532 | ||||
| WBsf038111 | 27034 | 27332 | ||||
| WBsf551710 | 11670 | 12452 | ||||
| WBsf551969 | 3251 | 4453 | ||||
| WBsf552094 | 11714 | 12007 | ||||
| WBsf552177 | 10806 | 11132 | ||||
| WBsf552325 | 5726 | 5782 | ||||
| WBsf552330 | 9650 | 9809 | ||||
| WBsf552505 | 26477 | 26604 | ||||
| WBsf552539 | 7829 | 7976 | ||||
| WBsf552691 | 3741 | 4462 | ||||
| WBsf552942 | 11149 | 11172 | ||||
| WBsf553307 | 2639 | 5500 | ||||
| WBsf554068 | 11675 | 12590 | ||||
| WBsf554519 | 2037 | 2362 | ||||
| WBsf554794 | 14493 | 14533 | ||||
| WBsf554814 | 13758 | 13764 | ||||
| WBsf554883 | 6729 | 7095 | ||||
| WBsf555086 | 2650 | 5504 | ||||
| WBsf556044 | 28477 | 29698 | ||||
| WBsf556452 | 1941 | 2377 | ||||
| WBsf557402 | 11646 | 12260 | ||||
| WBsf557671 | 3546 | 4548 | ||||
| WBsf558205 | 11650 | 12313 | ||||
| WBsf558377 | 1989 | 2347 | ||||
| WBsf558907 | 2714 | 5429 | ||||
| WBsf558992 | 11717 | 12573 | ||||
| WBsf559032 | 3545 | 4447 | ||||
| WBsf559291 | 28472 | 29313 | ||||
| WBsf559338 | 2137 | 2226 | ||||
| WBsf559341 | 11705 | 11972 | ||||
| WBsf560041 | 3662 | 4499 | ||||
| WBsf560205 | 29089 | 29559 | ||||
| WBsf560327 | 3632 | 4439 | ||||
| WBsf560530 | 28952 | 29269 | ||||
| WBsf560712 | 11799 | 11909 | ||||
| WBsf560986 | 3613 | 4377 | ||||
| WBsf561541 | 12164 | 12313 | ||||
| WBsf561608 | 3715 | 4276 | ||||
| WBsf562027 | 11737 | 11863 | ||||
| WBsf562309 | 3673 | 4312 | ||||
| WBsf562347 | 5623 | 5685 | ||||
| WBsf562421 | 15733 | 15798 | ||||
| WBsf562582 | 3472 | 4549 | ||||
| WBsf562594 | 11588 | 12373 | ||||
| WBsf562626 | 15082 | 15777 | ||||
| WBsf564294 | 28586 | 29612 | ||||
| WBsf564394 | 3462 | 5018 | ||||
| WBsf564730 | 3607 | 4319 | ||||
| WBsf564776 | 3639 | 4496 | ||||
| WBsf565030 | 3346 | 4467 | ||||
| WBsf565543 | 28829 | 29651 | ||||
| WBsf565767 | 3655 | 4520 | ||||
| WBsf565845 | 11657 | 11994 | ||||
| WBsf566199 | 3415 | 4620 | ||||
| WBsf566626 | 11714 | 12435 | ||||
| WBsf566789 | 3415 | 4620 | ||||
| WBsf567225 | 11714 | 12435 | ||||
| WBsf567547 | 2636 | 2898 | ||||
| WBsf567842 | 1953 | 2369 | ||||
| WBsf567875 | 3460 | 4484 | ||||
| WBsf567990 | 3531 | 4472 | ||||
| WBsf568395 | 3455 | 4519 | ||||
| WBsf568509 | 11677 | 12012 | ||||
| WBsf569469 | 3426 | 4490 | ||||
| WBsf570315 | 11635 | 12229 | ||||
| WBsf570794 | 1985 | 2329 | ||||
| WBsf571094 | 3481 | 4498 | ||||
| WBsf571315 | 11651 | 12002 | ||||
| WBsf571715 | 29529 | 29539 | ||||
| WBsf571829 | 3474 | 4452 | ||||
| WBsf572147 | 11664 | 12377 | ||||
| WBsf572806 | 3575 | 4454 | ||||
| WBsf573394 | 3105 | 4587 | ||||
| WBsf573780 | 1992 | 6428 | ||||
| WBsf574561 | 3419 | 4684 | ||||
| WBsf574672 | 3569 | 4580 | ||||
| WBsf574987 | 3430 | 4479 | ||||
| WBsf575053 | 11663 | 12030 | ||||
| WBsf575361 | 11755 | 11882 | ||||
| WBsf575365 | 4067 | 4352 | ||||
| WBsf575452 | 3311 | 4721 | ||||
| WBsf575493 | 26056 | 27237 | ||||
| WBsf576163 | 3501 | 4603 | ||||
| WBsf576685 | 24617 | 27267 | ||||
| WBsf576823 | 15908 | 16613 | ||||
| WBsf577025 | 3514 | 4588 | ||||
| WBsf577561 | 3538 | 4452 | ||||
| WBsf577729 | 3408 | 4486 | ||||
| WBsf577973 | 26077 | 26984 | ||||
| WBsf578118 | 11721 | 12390 | ||||
| WBsf578221 | 2072 | 2308 | ||||
| WBsf578256 | 6657 | 12469 | ||||
| WBsf578283 | 24081 | 29586 | ||||
| WBsf578295 | 3283 | 6449 | ||||
| WBsf578969 | 2637 | 5574 | ||||
| WBsf579111 | 2650 | 5556 | ||||
| WBsf579700 | 3034 | 4990 | ||||
| WBsf579974 | 24599 | 27328 | ||||
| WBsf580556 | 10999 | 11186 | ||||
| WBsf580698 | 9861 | 10673 | ||||
| WBsf580752 | 24218 | 28036 | ||||
| WBsf580758 | 2707 | 5579 | ||||
| WBsf580763 | 6768 | 10763 | ||||
| WBsf580946 | 28375 | 29532 | ||||
| WBsf580959 | 11014 | 11200 | ||||
| WBsf580975 | 11734 | 11999 | ||||
| WBsf581234 | 3682 | 4366 | ||||
| WBsf581603 | 11103 | 11106 | ||||
| WBsf581690 | 11716 | 11910 | ||||
| WBsf581778 | 3785 | 4317 | ||||
| WBsf582123 | 3492 | 4523 | ||||
| WBsf582842 | 11635 | 12111 | ||||
| WBsf584064 | 29353 | 29545 | ||||
| WBsf584182 | 2045 | 2304 | ||||
| WBsf584586 | 3314 | 4453 | ||||
| WBsf584961 | 11672 | 12325 | ||||
| WBsf585221 | 3460 | 4484 | ||||
| WBsf585270 | 1996 | 2405 | ||||
| WBsf585360 | 11658 | 12009 | ||||
| WBsf585905 | 2010 | 2475 | ||||
| WBsf585933 | 3364 | 4522 | ||||
| WBsf585959 | 11650 | 12023 | ||||
| WBsf586301 | 3485 | 4772 | ||||
| WBsf586515 | 11677 | 12435 | ||||
| WBsf586590 | 2043 | 2366 | ||||
| WBsf586696 | 3522 | 4449 | ||||
| WBsf587116 | 11681 | 12458 | ||||
| WBsf587267 | 27919 | 28369 | ||||
| WBsf587993 | 3342 | 4562 | ||||
| WBsf588095 | 11620 | 12438 | ||||
| WBsf588601 | 3268 | 4544 | ||||
| WBsf588918 | 11671 | 12383 | ||||
| WBsf589152 | 28210 | 29375 | ||||
| WBsf589635 | 3515 | 4603 | ||||
| WBsf589998 | 11690 | 12337 | ||||
| WBsf590417 | 3507 | 5538 | ||||
| WBsf590422 | 5784 | 10691 | ||||
| WBsf590443 | 25109 | 28121 | ||||
| WBsf590569 | 28379 | 29533 | ||||
| WBsf590714 | 10962 | 11319 | ||||
| WBsf591135 | 3512 | 4362 | ||||
| WBsf591331 | 2061 | 2287 | ||||
| WBsf592230 | 3355 | 4526 | ||||
| WBsf592601 | 3308 | 4645 | ||||
| WBsf592753 | 3588 | 4285 | ||||
| WBsf593109 | 2081 | 2243 | ||||
| WBsf593668 | 2834 | 2984 | ||||
| WBsf594041 | 3713 | 4378 | ||||
| WBsf594542 | 3330 | 4418 | ||||
| WBsf594793 | 2108 | 2127 | ||||
| WBsf594814 | 26943 | 27015 | ||||
| WBsf594890 | 3470 | 4506 | ||||
| WBsf595163 | 11263 | 12336 | ||||
| WBsf595714 | 3595 | 4398 | ||||
| WBsf595793 | 3631 | 4395 | ||||
| WBsf596342 | 3524 | 4432 | ||||
| WBsf596771 | 11751 | 11945 | ||||
| WBsf596821 | 2168 | 2222 | ||||
| WBsf597240 | 3526 | 4453 | ||||
| WBsf597538 | 11506 | 12305 | ||||
| WBsf598440 | 1928 | 2421 | ||||
| WBsf598983 | 28958 | 28997 | ||||
| WBsf599153 | 3584 | 4461 | ||||
| WBsf599420 | 2089 | 2282 | ||||
| WBsf599599 | 3486 | 4571 | ||||
| WBsf599841 | 26078 | 26918 | ||||
| WBsf599930 | 11710 | 11974 | ||||
| WBsf600438 | 3664 | 4439 | ||||
| WBsf982228 | 3042 | 4964 | ||||
| WBsf044563 | 1579 | 2954 | ||||
| WBsf044564 | 11383 | 12242 | ||||
| WBsf268355 | 30031 | 30031 | ||||
| WBsf899024 | 26472 | 26472 | ||||
| WBsf648484 | 4195 | 4209 | ||||
| WBsf648485 | 4262 | 4262 | ||||
| WBsf648486 | 4302 | 4375 | ||||
| WBsf648487 | 12265 | 12338 | ||||
| WBsf648488 | 26208 | 26244 | ||||
| WBsf648489 | 26715 | 26741 | ||||
| WBsf648490 | 29191 | 29278 | ||||
| WBsf648491 | 29394 | 29394 | ||||
| WBsf654346 | 29115 | 29087 | ||||
| WBsf654347 | 29317 | 29255 | ||||
| WBsf654348 | 29378 | 29366 | ||||
| WBsf655209 | 11826 | 11915 | ||||
| WBsf655701 | 6457 | 6403 | ||||
| WBsf662330 | 29446 | 29529 | ||||
| WBsf662386 | 15576 | 15576 | ||||
| WBsf663255 | 4863 | 4881 | ||||
| WBsf663256 | 8192 | 8192 | ||||
| WBsf663257 | 9016 | 9029 | ||||
| WBsf663258 | 26773 | 26846 | ||||
| WBsf670970 | 24408 | 24372 | ||||
| WBsf670971 | 24518 | 24518 | ||||
| WBsf670972 | 25651 | 25650 | ||||
| WBsf670973 | 26077 | 26051 | ||||
| WBsf670974 | 26114 | 26092 | ||||
| WBsf670975 | 26534 | 26493 | ||||
| WBsf670976 | 26723 | 26566 | ||||
| WBsf670977 | 26961 | 26961 | ||||
| WBsf670978 | 27598 | 27516 | ||||
| WBsf670979 | 27641 | 27616 | ||||
| WBsf670980 | 28023 | 28023 | ||||
| WBsf670981 | 28101 | 28076 | ||||
| WBsf670982 | 28201 | 28201 | ||||
| WBsf691202 | 2184 | 2275 | ||||
| WBsf691203 | 2714 | 2714 | ||||
| WBsf691204 | 2773 | 2807 | ||||
| WBsf691205 | 2995 | 3004 | ||||
| WBsf691206 | 3319 | 3403 | ||||
| WBsf691207 | 3706 | 3726 | ||||
| WBsf691208 | 3863 | 3895 | ||||
| WBsf691209 | 3981 | 4047 | ||||
| WBsf691210 | 24048 | 24071 | ||||
| WBsf691211 | 24273 | 24281 | ||||
| WBsf691212 | 24508 | 24532 | ||||
| WBsf691213 | 25659 | 25677 | ||||
| WBsf691214 | 28247 | 28267 | ||||
| WBsf691215 | 28698 | 28714 | ||||
| WBsf713179 | 2173 | 2117 | ||||
| WBsf713180 | 2720 | 2628 | ||||
| WBsf713181 | 2959 | 2892 | ||||
| WBsf713182 | 3308 | 3223 | ||||
| WBsf713183 | 3903 | 3531 | ||||
| WBsf713184 | 3967 | 3967 | ||||
| WBsf713185 | 4069 | 4026 | ||||
| WBsf713186 | 4213 | 4207 | ||||
| WBsf713187 | 8843 | 8843 | ||||
| WBsf713188 | 10584 | 10584 | ||||
| WBsf713189 | 10688 | 10674 | ||||
| WBsf713190 | 11850 | 11737 | ||||
| WBsf713191 | 12201 | 12169 | ||||
| WBsf713192 | 12287 | 12257 | ||||
| WBsf264321 | 13953 | 14027 | ||||
| WBsf264322 | 14080 | 14182 | ||||
| Feature_data | F57C7:Polysome | 1 | 30149 | |||
| F57C7:TranscriptionallyActiveRegion | 1 | 30149 | ||||
| F57C7:ChIPSeqTF | 1 | 30149 | ||||
| F57C7:TRF | 1 | 30149 | ||||
| F57C7:Dust | 1 | 30149 | ||||
| F57C7:inverted | 1 | 30149 | ||||
| Homol_data (20) | ||||||
| Structure | From | Source | CHROMOSOME_X | |||
| Overlap_right | M79 | 30045 | ||||
| Overlap_left | F59F5 | |||||
| Clone_left_end | F57C7 | 1 | ||||
| M79 | 30045 | |||||
| Clone_right_end | F59F5 | 4737 | ||||
| DB_info | Database | EMBL | NDB_AC | Z69646 | ||
| NDB_SV | Z69646.2 | |||||
| DB_remark | [121025] Sequence correction: SNP 0 bases @ 26472 | |||||
| [121025] Sequence correction WBsf268355 : Insertion C1 bases from @ 30030 | ||||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | White S | ||||
| From_laboratory | HX | |||||
| Date_directory | 950925 | |||||
| Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00000001 | |||||
| Visible | Clone | F57C7 | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | 77c5d99ac8f1fa4cbabfc7d137aa6ec8 | ||||
| Status | Finished | 25 Sep 1995 00:00:00 | ||||
| Submitted | 22 Feb 1996 00:00:00 | |||||
| Annotated | 21 Feb 1996 00:00:00 | |||||
| Map | Sequence-X | Ends | Left | 5682 | ||
| Right | 5705 | |||||
| Interpolated_map_position | X | 2.27996 | ||||
| Assembly_tags | annotation | 6484 | 6558 | 69 copies of TC shown. Restriction digest and PCR fragment agree, could be another 10 bases or so in the middle. | ||
| 6559 | 6626 | 69 copies of TC shown Restriction digest and PCR fragment agree could be another 10 bases or so in the middle | ||||
| 6726 | 6738 | ?2nd black tag | ||||
| 20502 | 20507 | Point mutation on both wh89c5.s1 and wh89c5.s1t | ||||
| Clone left end | 1 | 4 | ||||
| 30045 | 30048 | LHE M79 | ||||
| Finished Left | 1 | 4 | ||||
| Clone right end | 4734 | 4737 | RHE of F59F5 | |||
| Finished Right | 30145 | 30149 | ||||
| Method | Genomic_canonical |
