WormBase Tree Display for Sequence: R07D5
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R07D5 | DNA | R07D5 | 24629 | |||
---|---|---|---|---|---|---|
SMap | S_child | Gene_child | WBGene00200026 | 14549 | 14689 | |
WBGene00201791 | 4110 | 3988 | ||||
WBGene00197989 | 21597 | 21735 | ||||
WBGene00200679 | 12484 | 12620 | ||||
WBGene00195580 | 23517 | 23638 | ||||
WBGene00196247 | 18036 | 18170 | ||||
WBGene00199254 | 18167 | 18033 | ||||
CDS_child (96) | ||||||
Transcript (14) | ||||||
PCR_product | cenix:114-b4 | 1066 | 2306 | |||
cenix:140-h9 | 9552 | 10437 | ||||
mv_CAA79529 | 8777 | 14525 | ||||
mv_R07D5.2 | 125 | 3561 | ||||
p_R07D5.1_93 | 14527 | 16526 | ||||
sjj_R07D5.1 | 8779 | 10461 | ||||
sjj_R07D5.2 | 1339 | 2453 | ||||
Allele (421) | ||||||
Oligo_set | Aff_R07D5.1 | 10207 | 8774 | |||
Aff_R07D5.2 | 1917 | 123 | ||||
Feature_object | WBsf1008098 | 8242 | 8392 | |||
WBsf1008099 | 12642 | 12792 | ||||
WBsf1008100 | 13742 | 13892 | ||||
WBsf1008101 | 18782 | 18932 | ||||
WBsf1008102 | 19162 | 19312 | ||||
WBsf1008103 | 22062 | 22212 | ||||
WBsf1024512 | 8222 | 8372 | ||||
WBsf1024513 | 12642 | 12792 | ||||
WBsf1024514 | 19122 | 19272 | ||||
WBsf1024515 | 22042 | 22192 | ||||
WBsf021124 | 6865 | 6866 | ||||
WBsf038803 | 12453 | 12452 | ||||
WBsf116008 | 8579 | 8579 | ||||
WBsf132103 | 21611 | 21610 | ||||
WBsf204421 | 2479 | 2478 | ||||
WBsf210287 | 8579 | 8579 | ||||
WBsf215950 | 7814 | 7813 | ||||
WBsf238294 | 8773 | 7817 | ||||
WBsf238295 | 8773 | 8184 | ||||
WBsf238296 | 8773 | 8258 | ||||
WBsf238297 | 8773 | 8584 | ||||
WBsf238298 | 8773 | 8651 | ||||
WBsf238299 | 8773 | 8722 | ||||
WBsf259101 | 7800 | 7799 | ||||
WBsf267888 | 18684 | 18685 | ||||
WBsf278665 | 7816 | 7815 | ||||
WBsf279396 | 19802 | 19801 | ||||
WBsf640047 | 7932 | 7931 | ||||
WBsf973004 | 3569 | 3568 | ||||
WBsf559816 | 19168 | 19289 | ||||
WBsf560471 | 12197 | 12746 | ||||
WBsf560475 | 15184 | 15437 | ||||
WBsf560483 | 13779 | 13943 | ||||
WBsf560748 | 21939 | 22136 | ||||
WBsf561034 | 12174 | 12801 | ||||
WBsf561143 | 15159 | 15536 | ||||
WBsf561175 | 13838 | 13974 | ||||
WBsf561717 | 15244 | 15600 | ||||
WBsf561834 | 12146 | 12354 | ||||
WBsf562024 | 12582 | 12781 | ||||
WBsf562111 | 13795 | 13811 | ||||
WBsf585703 | 769 | 902 | ||||
WBsf593761 | 4183 | 4183 | ||||
WBsf594298 | 3872 | 3872 | ||||
WBsf600044 | 15253 | 15481 | ||||
WBsf600289 | 12549 | 12781 | ||||
WBsf038795 | 14372 | 12428 | ||||
WBsf671342 | 1422 | 1412 | ||||
WBsf671343 | 2424 | 2411 | ||||
WBsf671344 | 2851 | 2822 | ||||
WBsf671345 | 13790 | 13763 | ||||
WBsf692371 | 1625 | 1698 | ||||
WBsf692372 | 2925 | 2981 | ||||
WBsf692373 | 5344 | 5365 | ||||
WBsf692374 | 5620 | 5634 | ||||
WBsf692375 | 8148 | 8223 | ||||
WBsf692376 | 8258 | 8260 | ||||
WBsf692377 | 13940 | 13975 | ||||
WBsf692378 | 17336 | 17353 | ||||
WBsf692379 | 18643 | 18652 | ||||
WBsf692380 | 18963 | 18963 | ||||
WBsf714402 | 5204 | 5204 | ||||
WBsf714403 | 5285 | 5285 | ||||
WBsf714404 | 7949 | 7927 | ||||
WBsf714405 | 18862 | 18840 | ||||
WBsf714406 | 19262 | 19238 | ||||
WBsf714407 | 19778 | 19774 | ||||
WBsf714408 | 23539 | 23515 | ||||
WBsf264547 | 13529 | 13575 | ||||
Feature_data | R07D5:TranscriptionallyActiveRegion | 1 | 24629 | |||
R07D5:ChIPSeqTF | 1 | 24629 | ||||
R07D5:TRF | 1 | 24629 | ||||
R07D5:Dust | 1 | 24629 | ||||
R07D5:inverted | 1 | 24629 | ||||
Homol_data (18) | ||||||
Structure | From | Source | CHROMOSOME_X | |||
Overlap_right | C11G10 | 24526 | ||||
Overlap_left | F09B12 | |||||
Clone_left_end (2) | ||||||
Clone_right_end | F09B12 | 12426 | ||||
DB_info | Database | EMBL | NDB_AC | Z70685 | ||
NDB_SV | Z70685.1 | |||||
Keyword | HTG | |||||
EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
Origin | From_author | Smye R | ||||
From_laboratory | HX | |||||
Date_directory | 951024 | |||||
Species | Caenorhabditis elegans | |||||
Strain | WBStrain00000001 | |||||
Visible | Clone | R07D5 | ||||
Properties | Genomic_canonical | |||||
Checksum | MD5 | 52e3a7c8fd47520537618270de1ca09c | ||||
Status | Finished | 24 Oct 1995 00:00:00 | ||||
Submitted | 06 Apr 1996 00:00:00 | |||||
Annotated | 03 Apr 1996 00:00:00 | |||||
Map | Sequence-X | Ends | Left | 8243 | ||
Right | 8261 | |||||
Interpolated_map_position | X | 22.0129 | ||||
Assembly_tags | Finished Left | 1 | 1 | |||
Clone right end | 12423 | 12426 | F09B12 | |||
annotation | 13906 | 13909 | sequence unclear on this region | |||
13911 | 13934 | unsure about the number of C's here. | ||||
Finished Right | 24629 | 24629 | ||||
Clone left end | 1 | 6 | R07D5 left hand end. | |||
24526 | 24529 | C11G10 left hand end. | ||||
Method | Genomic_canonical |