WormBase Tree Display for Sequence: C05D9
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| C05D9 | DNA | C05D9 | 34884 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00015471 | 24597 | 27289 | |
| WBGene00015473 | 7040 | 9142 | ||||
| WBGene00015476 | 23228 | 21403 | ||||
| WBGene00015472 | 10885 | 15837 | ||||
| WBGene00002062 | 3194 | 5233 | ||||
| WBGene00219800 | 6061 | 6189 | ||||
| WBGene00015474 | 18387 | 16181 | ||||
| WBGene00004927 | 27968 | 31693 | ||||
| WBGene00199484 | 9865 | 9941 | ||||
| WBGene00196246 | 9941 | 9865 | ||||
| CDS_child (292) | ||||||
| Transcript | C05D9.10 | 9941 | 9865 | |||
| C05D9.11 | 9865 | 9941 | ||||
| C05D9.12 | 6061 | 6189 | ||||
| C05D9.1.1 | 27968 | 31693 | ||||
| C05D9.2.1 | 24597 | 27270 | ||||
| C05D9.2.2 | 24614 | 27289 | ||||
| C05D9.2.3 | 24727 | 27289 | ||||
| C05D9.3a.1 | 10885 | 15837 | ||||
| C05D9.3b.1 | 10898 | 15833 | ||||
| C05D9.4.1 | 7040 | 9142 | ||||
| C05D9.5.1 | 3194 | 5233 | ||||
| C05D9.7.1 | 18387 | 16181 | ||||
| C05D9.9a.1 | 23228 | 21403 | ||||
| C05D9.9b.1 | 23188 | 21404 | ||||
| Nongenomic | yk149h11 | 24779 | 27183 | |||
| yk303b6 | 21470 | 23206 | ||||
| PCR_product (24) | ||||||
| Allele (438) | ||||||
| Oligo_set | Aff_C05D9.1 | 29610 | 31393 | |||
| Aff_C05D9.2 | 25919 | 27202 | ||||
| Aff_C05D9.3 | 13395 | 15442 | ||||
| Aff_C05D9.4 | 7049 | 7398 | ||||
| Aff_C05D9.5 | 3235 | 5024 | ||||
| Aff_C05D9.7 | 18184 | 16329 | ||||
| Aff_C05D9.8 | 33233 | 32089 | ||||
| Aff_C05D9.6 | 788 | 2164 | ||||
| Feature_object (310) | ||||||
| Feature_data | C05D9:Polysome | 1 | 34884 | |||
| C05D9:TranscriptionallyActiveRegion | 1 | 34884 | ||||
| C05D9:ChIPSeqTF | 1 | 34884 | ||||
| C05D9:TRF | 1 | 34884 | ||||
| C05D9:Dust | 1 | 34884 | ||||
| C05D9:inverted | 1 | 34884 | ||||
| Homol_data (20) | ||||||
| Structure | From | Source | CHROMOSOME_X | |||
| Overlap_right | R193 | 32635 | ||||
| Overlap_left | F49E7 | |||||
| Clone_left_end | C05D9 | 1 | ||||
| R193 | 33152 | |||||
| Clone_right_end | F49E7 | 18494 | ||||
| DB_info | Database | EMBL | NDB_AC | FO080359 | ||
| NDB_ID | _U64605 | |||||
| NDB_SV | FO080359.2 | |||||
| Secondary_accession | U64605 | |||||
| DB_remark | The 5' clone is F49E7, 2300 bp overlap; the 3' clone is R193, 2250 bp overlap. Actual start of this clone is at base position 1 of C05D9; actual end is at 11141 of R193. | |||||
| [121025] Sequence correction: SNP 0 bases @ 32508 | ||||||
| [121025] Sequence correction: SNP 0 bases @ 32540 | ||||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Fulton L | ||||
| Gattung S | ||||||
| From_laboratory | RW | |||||
| Date | 22 May 1996 00:00:00 | |||||
| Date_directory | 960520 | |||||
| Species | Caenorhabditis elegans | |||||
| Visible | Clone | C05D9 | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | bb979be2dc9703ef184217fc148b3d35 | ||||
| Status | Shotgun | |||||
| Finished | ||||||
| Submitted | 22 May 1996 00:00:00 | |||||
| Map | Sequence-X | |||||
| Interpolated_map_position | X | -18.5426 | ||||
| Method | Genomic_canonical |
