WormBase Tree Display for Sequence: C34C12
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| C34C12 | DNA | C34C12 | 34761 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child (11) | ||||
| CDS_child (259) | ||||||
| Transcript (13) | ||||||
| Nongenomic | yk318g3 | 4298 | 7855 | |||
| PCR_product (41) | ||||||
| Allele (622) | ||||||
| Oligo_set | Aff_C34C12.1 | 3066 | 3665 | |||
| Aff_C34C12.2 | 6732 | 7860 | ||||
| Aff_C34C12.3 | 12015 | 14793 | ||||
| Aff_C34C12.4 | 17097 | 16684 | ||||
| Aff_C34C12.5 | 20553 | 21383 | ||||
| Aff_C34C12.6 | 31354 | 32561 | ||||
| Aff_C34C12.7 | 33840 | 32674 | ||||
| Aff_C34C12.8 | 8392 | 9239 | ||||
| Feature_object (464) | ||||||
| Feature_data | C34C12:Polysome | 1 | 34761 | |||
| C34C12:TranscriptionallyActiveRegion | 1 | 34761 | ||||
| C34C12:ChIPSeqTF | 1 | 34761 | ||||
| C34C12:TRF | 1 | 34761 | ||||
| C34C12:Dust | 1 | 34761 | ||||
| C34C12:inverted | 1 | 34761 | ||||
| Homol_data (19) | ||||||
| Structure | From | Source | CHROMOSOME_III | |||
| Overlap_right | M01F1 | 34658 | ||||
| Overlap_left | K01A11 | |||||
| Clone_left_end | C34C12 | 1 | ||||
| F52D10 | 34658 | |||||
| Clone_right_end | K01A11 | 7438 | ||||
| DB_info | Database | EMBL | NDB_AC | Z46996 | ||
| NDB_SV | Z46996.3 | |||||
| DB_remark | [061108 wormpub] Sequence correction: Insertion 1 bases gataaatccgacttggcgggGaagttcttgccgccctgg @ 31573 | |||||
| [121025] Sequence correction: SNP 0 bases @ 11159 | ||||||
| [121025] Sequence correction: SNP 0 bases @ 14967 | ||||||
| [121025] Sequence correction: SNP 0 bases @ 15296 | ||||||
| [121025] Sequence correction: SNP 0 bases @ 16493 | ||||||
| [121025] Sequence correction WBsf268094 : Insertion C1 bases from @ 22462 | ||||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Kershaw JK | ||||
| From_laboratory | HX | |||||
| Date_directory | 061109 | |||||
| Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00000001 | |||||
| Visible | Clone | C34C12 | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | c7c382b8d53b3ba17f4db1537597da6d | ||||
| Status | Finished | 19 Dec 1994 00:00:00 | ||||
| Submitted | 22 Dec 1994 00:00:00 | |||||
| Annotated | 21 Dec 1994 00:00:00 | |||||
| Map | Sequence-III | Ends | Left | 1469 | ||
| Right | 1499 | |||||
| Interpolated_map_position | III | -6.64972 | ||||
| Assembly_tags | annotation | 1 | 4 | left end of C34C12 | ||
| 7435 | 7438 | end of K01A11 | ||||
| 11638 | 11648 | 10 T's -best guess (could be 9-12) | ||||
| 14825 | 15033 | single stranded with terminators | ||||
| 15034 | 15251 | single stranded with terminators | ||||
| 15899 | 15919 | single stranded with terminators | ||||
| 16214 | 16268 | single stranded with terminators | ||||
| 16306 | 16306 | unable to call this base terminators etc. tried. | ||||
| 34658 | 34661 | beginning of M01F1 | ||||
| Method | Genomic_canonical |
