WormBase Tree Display for Sequence: Y55B1BL

Y55B1BL DNA: Y55B1BL 6829
  SMap: S_child: Gene_child: WBGene00021909 409 3640
        WBGene00303093 788 868
      CDS_child: Y55B1BL.1:wp183 1600 2442
        Y55B1BL.1a 1600 3242
        Y55B1BL.1b 2076 3242
        Y55B1BL.1d:wp264 788 868
        Y55B1BL.2 788 868
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g25_x1_III_p 449 1537
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g2_x1_III_p 449 1537
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g3_x1_III_p 449 1537
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g6n11_x1_III_p 2076 3239
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g7_x1_III_p 449 1537
        RNASEQ_embryo_him-8_20dC_post-L1_g24_x1_III_p 449 1537
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g2_x1_III_p 449 1537
        RNASEQ_L4_soma_JK1107_no_DNaseI_g33n11_x1_III_p 1600 2154
        RNASEQ_L4_soma_JK1107_no_DNaseI_g30n11_x1_III_p 2076 3239
        RNASEQ_L4_soma_JK1107_no_DNaseI_g48_x1_III_p 449 1537
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g9n11_x1_III_p 3318 3398
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g10n11_x1_III_p 2076 3239
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g10n11e2k51_x1_III_p 2354 2439
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g10e4k51_x1_III_p 449 1537
        RNASEQ_early_embryo_g25_x1_III_p 1600 3239
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g9_x1_III_p 1600 3239
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g14_x1_III_p 449 1537
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g10_x1_III_p 449 1537
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g10s3k80_x1_III_p 2076 3239
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g7_x1_III_p 1600 3239
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g31n11_x1_III_p 1138 2436
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g126_x1_III_p 5975 6022
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g28_x1_III_p 1600 3239
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g42n11_x1_III_p 2076 3239
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g47n11_x1_III_p 1600 2154
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g43n11_x1_III_p 2076 3239
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g49_x1_III_p 464 1537
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g20_x1_III_p 455 1537
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g30_x1_III_p 449 1537
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g28_x1_III_p 1600 3239
        Y55B1BL.gc1 1600 2442
        ContigIII.elegans.jigsaw.66.mRNA66 778 3632
        AG1201_Y55B1BL.1.T7 449 1540
        AG1201_Y55B1BL.1.T5 1600 2174
        AG1201_Y55B1BL.1.T6 1600 3242
        AG1201_Y55B1BL.1.T2 2076 3242
        AG1201_Y55B1BL.1.T1 3364 3537
      Transcript: Y55B1BL.1c 449 3242
        Y55B1BL.1a.1 409 3640
        Y55B1BL.1a.2 517 3640
        Y55B1BL.1b.1 2076 3242
        Y55B1BL.2.1 788 868
      PCR_product: cenix:190-d8 1995 2139
        mv_Y55B1BL.a 1601 2440
        sjj_Y55B1B_121.b 1196 3291
        smd_Y55B1B_121.b 1196 3291
      Allele: WBVar02073967 4364 4365
        WBVar00029923 774 774
        WBVar00029933 1741 1741
        WBVar00029938 3136 3136
        WBVar01627672 4335 4335
        WBVar00029943 5281 5281
        WBVar01917620 2198 2199
        WBVar01389038 4782 4782
        WBVar01389039 4783 4783
        WBVar01836806 4196 4196
        WBVar01506025 446 446
        WBVar01506026 2199 2199
        WBVar02012592 2812 2820
        WBVar01506027 4882 4882
        WBVar02131349 1109 1109
        WBVar02131350 4778 4778
        WBVar02029947 66 66
        WBVar02029948 972 973
        WBVar02029949 1425 1426
        WBVar02029950 3470 3470
        WBVar02029951 4651 4678
        WBVar02029952 4841 4914
        WBVar02029953 5130 5133
        WBVar02029954 5585 5586
        WBVar01768484 250 250
        WBVar01768485 974 974
        WBVar01768486 975 975
        WBVar01768487 1159 1159
        WBVar01768488 1171 1171
        WBVar00796795 81 81
        WBVar00796796 85 85
        WBVar01768489 3197 3197
        WBVar00796797 104 104
        WBVar01768490 3511 3511
        WBVar01768491 3607 3607
        WBVar00796798 147 147
        WBVar00796799 347 347
        WBVar01768492 3793 3793
        WBVar00796800 662 662
        WBVar01768493 4002 4002
        WBVar01768494 4015 4015
        WBVar00796801 820 820
        WBVar00796802 919 919
        WBVar01768495 4799 4799
        WBVar00796803 1045 1045
        WBVar01768496 5018 5018
        WBVar01768497 5134 5134
        WBVar00796804 1135 1135
        WBVar00796805 1368 1368
        WBVar01768498 5142 5142
        WBVar01768499 5388 5388
        WBVar00796806 1369 1369
        WBVar00796807 1438 1438
        WBVar01768500 6005 6005
        WBVar00796808 1656 1656
        WBVar00796809 1728 1728
        WBVar02069389 527 528
        WBVar00796810 1930 1930
        WBVar02069390 5034 5035
        WBVar00796811 2078 2078
        WBVar00796812 2184 2184
        WBVar00796813 2185 2185
        WBVar00796814 2267 2267
        WBVar01902989 3725 3725
        WBVar00796815 2490 2490
        WBVar00796816 2523 2523
        WBVar01902990 4279 4279
        WBVar01902991 4752 4752
        WBVar00796817 2572 2572
        WBVar01902992 5534 5534
        WBVar00796818 2580 2580
        WBVar00796819 2636 2636
        WBVar00796820 2696 2696
        WBVar00796821 2734 2734
        WBVar00796822 2747 2747
        WBVar00796823 2869 2869
        WBVar00796824 2982 2982
        WBVar00796825 3139 3139
        WBVar00005346 1052 1052
        WBVar00796826 3157 3157
        WBVar00796827 3271 3271
        WBVar00796828 3342 3342
        WBVar00796829 3487 3487
        WBVar00796830 3641 3641
        WBVar00796831 3721 3721
        WBVar00796832 4091 4091
        WBVar00796833 4105 4105
        WBVar00796834 4818 4818
        WBVar00796835 4888 4888
        WBVar00796836 4991 4991
        WBVar00796837 5020 5020
        WBVar00796838 5084 5084
        WBVar00796839 5171 5171
        WBVar00796840 5694 5694
        WBVar00796841 5838 5838
        WBVar01399823 3469 3470
        WBVar02106733 3720 3726
        WBVar00095370 1465 1465
        WBVar01706404 5655 5655
        WBVar01706405 6006 6006
        WBVar01831303 2418 2418
        WBVar01443049 620 620
        WBVar01443050 622 622
        WBVar01443051 664 664
        WBVar01443053 1374 1374
        WBVar01443054 3107 3107
        WBVar01443056 5808 5808
        WBVar01564063 948 948
        WBVar01564064 3028 3028
        WBVar01564065 4165 4165
        WBVar01417208 4650 4651
        WBVar00387786 184 184
        WBVar00387787 414 414
        WBVar00387788 472 472
        WBVar01893047 5785 5785
        WBVar00387789 893 893
        WBVar00387790 975 975
        WBVar00387791 1124 1124
        WBVar00387792 1452 1452
        WBVar00387793 1511 1511
        WBVar00387794 1628 1628
        WBVar00387795 2183 2183
        WBVar00387796 2259 2259
        WBVar00387797 2479 2479
        WBVar00387798 2585 2585
        WBVar00387799 2822 2822
        WBVar01540503 6117 6117
        WBVar00387800 3332 3332
        WBVar00387801 3839 3839
        WBVar00387802 3974 3974
        WBVar00387803 4089 4089
        WBVar00387804 4451 4451
        WBVar01700349 1186 1186
        WBVar00387805 5044 5044
        WBVar01700350 3649 3649
        WBVar00387806 5746 5746
        WBVar00387807 6045 6045
      Oligo_set: Aff_Y55B1B_121.B 1600 2442
      Feature_object: WBsf1014060 2566 2716
        WBsf072959 6149 6149
        WBsf074850 3433 3433
        WBsf126734 2022 2023
        WBsf161443 1526 1527
        WBsf163123 6149 6149
        WBsf164905 3407 3407
        WBsf166001 3448 3448
        WBsf169539 3393 3393
        WBsf224360 3243 3298
        WBsf224361 3243 3630
        WBsf226099 6153 6442
        WBsf245481 3629 3630
        WBsf245482 3586 3587
        WBsf245483 6152 6151
        WBsf615461 5573 5572
        WBsf615707 6113 6112
        WBsf617777 3471 3472
        WBsf619337 3615 3616
        WBsf619757 3640 3641
        WBsf619862 3514 3515
        WBsf957884 197 198
        WBsf957898 3210 3211
        WBsf957906 4689 4688
        WBsf396014 163 685
        WBsf397923 280 510
        WBsf400003 4647 4673
        WBsf400419 4646 4673
        WBsf400794 4488 4676
        WBsf401375 231 540
        WBsf402247 3863 4107
        WBsf403599 155 583
        WBsf407164 4647 4675
        WBsf409345 4647 4673
        WBsf412505 3642 3757
        WBsf413731 4647 4671
        WBsf414660 3280 3984
        WBsf418835 3607 3948
        WBsf419750 3719 3777
        WBsf420981 2897 3027
        WBsf421087 3698 3841
        WBsf422580 3750 3792
        WBsf423274 4646 4674
        WBsf423533 4478 4676
        WBsf424411 189 586
        WBsf434432 164 3982
        WBsf437794 4647 4675
        WBsf439336 4625 4675
        WBsf644912 363 595
        WBsf700201 380 360
      Feature_data: Y55B1BL:Polysome 1 6829
        Y55B1BL:TranscriptionallyActiveRegion 1 6829
        Y55B1BL:ChIPSeqTF 1 6829
        Y55B1BL:TRF 1 6829
        Y55B1BL:Dust 1 6829
        Y55B1BL:inverted 1 6829
      Homol_data: Y55B1BL:RNAi 1 6829
        Y55B1BL:SAGE 1 6829
        Y55B1BL:wublastx_brenneri 1 6829
        Y55B1BL:wublastx_briggsae 1 6829
        Y55B1BL:wublastx_remanei 1 6829
        Y55B1BL:wublastx_worm 1 6829
        Y55B1BL:RepeatMasker 1 6829
  Structure: From: Source: CHROMOSOME_III
    Overlap_right: Y55B1BM 6130
    Overlap_left: K10F12
    Clone_left_end: Y55B1BL 1
    Clone_right_end: K10F12 200
      Y55B1BL 6829
  DB_info: Database: EMBL NDB_AC FO081622
        NDB_ID _AC024822
        NDB_SV FO081622.1
    Secondary_accession: AC024822
    DB_remark: The 5' clone is K10F12, 200 bp overlap; the 3' clone is Y55B1BM, 700 bp overlap.
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Smith A
    From_laboratory: RW
    Date: 22 Dec 1999 00:00:00
    Date_directory
    Species: Caenorhabditis elegans
  Visible: Clone: Y55B1BL
  Properties: Genomic_canonical
    Checksum: MD5: d3549ac35a131aa960c12dff3254e641
    Status: Finished
      Submitted: 22 Dec 1999 00:00:00
  Map: Sequence-III
  Interpolated_map_position: III -26.8738
  Method: Genomic_canonical