WormBase Tree Display for Variation: WBVar00165065
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WBVar00165065 | Evidence | Paper_evidence | WBPaper00037807 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar00165065 | ||||
Other_name | haw18315 | |||||
cewivar00177432 | ||||||
CE08010:p.Asn137His | ||||||
C08E3.7.1:c.409A>C | ||||||
HGVSg | CHROMOSOME_II:g.1613474T>G | |||||
Sequence_details | SMap | S_parent | Sequence | C08E3 | ||
Flanking_sequences | aaactgtaaaattcaacctttcgat | ttccatcatcaacttgagatccttg | ||||
Mapping_target | C08E3 | |||||
Type_of_mutation | Substitution | T | G | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Predicted_SNP | ||||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | |||
WGS_Hawaiian_Waterston | ||||||
Million_mutation_project_reanalysis | ||||||
WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00022850 | From_analysis | WGS_De_Bono | ||||
Million_mutation_project_reanalysis | ||||||
WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | ||||
Laboratory | RW | |||||
AX | ||||||
Person | WBPerson1562 | |||||
Analysis | WGS_Hawaiian_Waterston | |||||
WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | ||||||
History | Acquires_merge | WBVar01360833 | ||||
WBVar01295615 | ||||||
Status | Live | |||||
Affects | Gene | WBGene00015599 | ||||
Transcript | C08E3.7.1 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | |||||
SIFT | 0.01 | deleterious | ||||
PolyPhen | 0.981 | probably_damaging | ||||
HGVSc | C08E3.7.1:c.409A>C | |||||
HGVSp | CE08010:p.Asn137His | |||||
cDNA_position | 479 | |||||
CDS_position | 409 | |||||
Protein_position | 137 | |||||
Exon_number | 4/6 | |||||
Codon_change | Aat/Cat | |||||
Amino_acid_change | N/H | |||||
Reference | WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw18315 | |||||
Method | WGS_Hawaiian_Waterston |