WormBase Tree Display for Variation: WBVar00241329
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WBVar00241329 | Evidence | Paper_evidence | WBPaper00005804 | |||
---|---|---|---|---|---|---|
Name | Public_name | r367 | ||||
Other_name | C47E8.7.1:c.254C>T | |||||
CE05443:p.Thr85Ile | ||||||
HGVSg | CHROMOSOME_V:g.14694964G>A | |||||
Sequence_details | SMap | S_parent | Sequence | C47E8 | ||
Flanking_sequences | ctcttgaccagaatggaattacagctgaaa | acaattggagttcacaccaatgcataaaga | ||||
Mapping_target | C47E8 | |||||
Type_of_mutation | Substitution | c | t | |||
SeqStatus | Sequenced | |||||
Variation_type | Allele | |||||
Origin | Species | Caenorhabditis elegans | ||||
Strain (12) | ||||||
Laboratory | TR | |||||
Status | Live | |||||
Linked_to | WBVar00241330 | |||||
WBVar00241331 | ||||||
WBVar00241332 | ||||||
WBVar00241333 | ||||||
Affects | Gene | WBGene00006836 | ||||
Transcript | C47E8.7.1 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | |||||
SIFT | 0 | deleterious | ||||
PolyPhen | 0.959 | probably_damaging | ||||
HGVSc | C47E8.7.1:c.254C>T | |||||
HGVSp | CE05443:p.Thr85Ile | |||||
cDNA_position | 279 | |||||
CDS_position | 254 | |||||
Protein_position | 85 | |||||
Exon_number | 4/8 | |||||
Codon_change | aCa/aTa | |||||
Amino_acid_change | T/I | |||||
Interactor | WBInteraction000501326 | |||||
WBInteraction000501327 | ||||||
WBInteraction000518971 | ||||||
WBInteraction000519427 | ||||||
WBInteraction000519460 | ||||||
WBInteraction000519461 | ||||||
WBInteraction000519462 | ||||||
WBInteraction000519463 | ||||||
WBInteraction000519464 | ||||||
Genetics | Interpolated_map_position | V | 6.70023 | |||
Description | Phenotype (10) | |||||
Reference | WBPaper00040284 | |||||
WBPaper00040652 | ||||||
WBPaper00031671 | ||||||
WBPaper00023580 | ||||||
WBPaper00046120 | ||||||
Method | Substitution_allele |