WormBase Tree Display for Variation: WBVar00165409
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WBVar00165409 | Evidence | Paper_evidence | WBPaper00037807 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar00165409 | ||||
Other_name | haw18659 | |||||
cewivar00178311 | ||||||
F36H5.5.1:c.482T>A | ||||||
CE53939:p.Phe161Tyr | ||||||
HGVSg | CHROMOSOME_II:g.1758863T>A | |||||
Sequence_details | SMap | S_parent | Sequence | F36H5 | ||
Flanking_sequences | aaagggcaaaaaattgggtacctct | cattggcttgacttctgatcccgaa | ||||
Mapping_target | F36H5 | |||||
Type_of_mutation | Substitution | T | A | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Predicted_SNP | ||||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00004602 | From_analysis | WGS_De_Bono | |||
WGS_Hawaiian_Waterston | ||||||
Million_mutation_project_reanalysis | ||||||
WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | ||||
Laboratory | RW | |||||
AX | ||||||
Person | WBPerson1562 | |||||
Analysis | WGS_Hawaiian_Waterston | |||||
WGS_De_Bono | ||||||
Million_mutation_project_reanalysis | ||||||
History | Acquires_merge | WBVar01361440 | ||||
Status | Live | |||||
Affects | Gene | WBGene00018104 | ||||
Transcript | F36H5.5.1 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | |||||
SIFT | 1 | tolerated | ||||
PolyPhen | 0.299 | benign | ||||
HGVSc | F36H5.5.1:c.482T>A | |||||
HGVSp | CE53939:p.Phe161Tyr | |||||
cDNA_position | 1928 | |||||
CDS_position | 482 | |||||
Protein_position | 161 | |||||
Exon_number | 3/4 | |||||
Codon_change | tTc/tAc | |||||
Amino_acid_change | F/Y | |||||
Reference | WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw18659 | |||||
Method | WGS_Hawaiian_Waterston |