WormBase Tree Display for Variation: WBVar00089629
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WBVar00089629 | Evidence | Paper_evidence | WBPaper00000486 | ||||
---|---|---|---|---|---|---|---|
WBPaper00006135 | |||||||
Name | Public_name | n619 | |||||
Other_name | R09G11.1.1:c.262G>A | ||||||
CE12656:p.Glu88Lys | |||||||
HGVSg | CHROMOSOME_X:g.17530208G>A | ||||||
Sequence_details | SMap | S_parent | Sequence | R09G11 | |||
Flanking_sequences | ttcaatcagaagaaaggatatcaagagccc | agacaattacttattactatcacacttacc | |||||
Mapping_target | R09G11 | ||||||
Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00000486 | ||
WBPaper00006135 | |||||||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Laboratory | MT | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00006319 | |||||
Transcript | R09G11.1.1 | VEP_consequence | missense_variant | ||||
VEP_impact | MODERATE | ||||||
SIFT | 0.05 | deleterious | |||||
PolyPhen | 0.944 | possibly_damaging | |||||
HGVSc | R09G11.1.1:c.262G>A | ||||||
HGVSp | CE12656:p.Glu88Lys | ||||||
cDNA_position | 328 | ||||||
CDS_position | 262 | ||||||
Protein_position | 88 | ||||||
Exon_number | 4/8 | ||||||
Codon_change | Gag/Aag | ||||||
Amino_acid_change | E/K | ||||||
Isolation | Mutagen | EMS | |||||
Genetics | Interpolated_map_position | X | 24.1669 | ||||
Reference | WBPaper00000486 | ||||||
WBPaper00006135 | |||||||
Remark | Greenwald and Horvitz (1980) | ||||||
Method | Substitution_allele |