WormBase Tree Display for Variation: WBVar00142910
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WBVar00142910 | Evidence | Paper_evidence | WBPaper00002646 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | e15 | |||||
Other_name (8) | |||||||
HGVSg | CHROMOSOME_IV:g.7201523G>A | ||||||
Sequence_details | SMap | S_parent | Sequence | R13A1 | |||
Flanking_sequences | aggataattttcaggacctcaaagatgcgg | agccatcacaactcaaacaaaagaaaattt | |||||
Mapping_target | R13A1 | ||||||
Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00002646 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00004079 | ||||||
WBStrain00006289 | |||||||
WBStrain00006290 | |||||||
WBStrain00026625 | |||||||
WBStrain00026628 | |||||||
WBStrain00026629 | |||||||
WBStrain00026630 | |||||||
WBStrain00026631 | |||||||
WBStrain00026633 | |||||||
Laboratory | CB | ||||||
Status | Live | ||||||
Linked_to | WBVar00142911 | ||||||
WBVar00142912 | |||||||
WBVar00142913 | |||||||
WBVar00142914 | |||||||
Affects | Gene | WBGene00006748 | |||||
Transcript | R13A1.4d.1 (12) | ||||||
R13A1.4c.1 (12) | |||||||
R13A1.4a.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | ||||||
SIFT | 0.04 | deleterious | |||||
PolyPhen | 0.953 | possibly_damaging | |||||
HGVSc | R13A1.4a.1:c.1160G>A | ||||||
HGVSp | CE26381:p.Gly387Glu | ||||||
cDNA_position | 1160 | ||||||
CDS_position | 1160 | ||||||
Protein_position | 387 | ||||||
Exon_number | 12/21 | ||||||
Codon_change | gGa/gAa | ||||||
Amino_acid_change | G/E | ||||||
R13A1.4b.1 (12) | |||||||
Interactor | WBInteraction000517772 | ||||||
WBInteraction000517956 | |||||||
Genetics | Interpolated_map_position | IV | 3.29358 | ||||
Mapping_data (2) | |||||||
Description | Phenotype (21) | ||||||
Reference | WBPaper00010943 | ||||||
WBPaper00015305 | |||||||
WBPaper00015371 | |||||||
WBPaper00043908 | |||||||
WBPaper00022049 | |||||||
WBPaper00000031 | |||||||
WBPaper00002487 | |||||||
WBPaper00015036 | |||||||
WBPaper00024207 | |||||||
WBPaper00018951 | |||||||
Method | Substitution_allele |