WormBase Tree Display for Variation: WBVar00142910
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WBVar00142910 | Evidence | Paper_evidence | WBPaper00002646 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | e15 | |||||
Other_name | CE48967:p.Gly386Glu | ||||||
CE26381:p.Gly387Glu | |||||||
R13A1.4a.1:c.1160G>A | |||||||
R13A1.4c.1:c.1163G>A | |||||||
R13A1.4b.1:c.1157G>A | |||||||
CE49123:p.Gly388Glu | |||||||
R13A1.4d.1:c.1040G>A | |||||||
CE04840:p.Gly347Glu | |||||||
HGVSg | CHROMOSOME_IV:g.7201523G>A | ||||||
Sequence_details | SMap | S_parent | Sequence | R13A1 | |||
Flanking_sequences | aggataattttcaggacctcaaagatgcgg | agccatcacaactcaaacaaaagaaaattt | |||||
Mapping_target | R13A1 | ||||||
Type_of_mutation | Substitution | g | a | Paper_evidence | WBPaper00002646 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain (9) | |||||||
Laboratory | CB | ||||||
Status | Live | ||||||
Linked_to | WBVar00142911 | ||||||
WBVar00142912 | |||||||
WBVar00142913 | |||||||
WBVar00142914 | |||||||
Affects | Gene | WBGene00006748 | |||||
Transcript | R13A1.4d.1 (12) | ||||||
R13A1.4c.1 (12) | |||||||
R13A1.4a.1 (12) | |||||||
R13A1.4b.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | ||||||
SIFT | 0.05 | deleterious | |||||
PolyPhen | 0.996 | probably_damaging | |||||
HGVSc | R13A1.4b.1:c.1157G>A | ||||||
HGVSp | CE48967:p.Gly386Glu | ||||||
cDNA_position | 1157 | ||||||
CDS_position | 1157 | ||||||
Protein_position | 386 | ||||||
Exon_number | 12/20 | ||||||
Codon_change | gGa/gAa | ||||||
Amino_acid_change | G/E | ||||||
Interactor | WBInteraction000517772 | ||||||
WBInteraction000517956 | |||||||
Genetics | Interpolated_map_position | IV | 3.29358 | ||||
Mapping_data (2) | |||||||
Description | Phenotype (21) | ||||||
Reference | WBPaper00010943 | ||||||
WBPaper00015305 | |||||||
WBPaper00015371 | |||||||
WBPaper00043908 | |||||||
WBPaper00022049 | |||||||
WBPaper00000031 | |||||||
WBPaper00002487 | |||||||
WBPaper00015036 | |||||||
WBPaper00024207 | |||||||
WBPaper00018951 | |||||||
Method | Substitution_allele |