WormBase Tree Display for Variation: WBVar00088481
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WBVar00088481 | Evidence | Paper_evidence | WBPaper00002646 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | lb129 | |||||
Other_name | R13A1.4b.1:c.337C>T | ||||||
CE04840:p.His74Tyr | |||||||
CE48967:p.His113Tyr | |||||||
R13A1.4a.1:c.340C>T | |||||||
CE49123:p.His115Tyr | |||||||
CE26381:p.His114Tyr | |||||||
R13A1.4d.1:c.220C>T | |||||||
R13A1.4c.1:c.343C>T | |||||||
HGVSg | CHROMOSOME_IV:g.7200290C>T | ||||||
Sequence_details | SMap | S_parent | Sequence | R13A1 | |||
Flanking_sequences | tggtttgatttttgtgccagaacttcttcc | atggaataccatatgttgcgtacggttttt | |||||
Mapping_target | R13A1 | ||||||
Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00002646 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Laboratory | MP | ||||||
Status | Live | ||||||
Linked_to | WBVar00142912 | ||||||
Affects | Gene | WBGene00006748 | |||||
Transcript | R13A1.4d.1 (12) | ||||||
R13A1.4c.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | ||||||
SIFT | 0 | deleterious | |||||
PolyPhen | 1 | probably_damaging | |||||
HGVSc | R13A1.4c.1:c.343C>T | ||||||
HGVSp | CE49123:p.His115Tyr | ||||||
cDNA_position | 343 | ||||||
CDS_position | 343 | ||||||
Protein_position | 115 | ||||||
Exon_number | 3/19 | ||||||
Codon_change | Cat/Tat | ||||||
Amino_acid_change | H/Y | ||||||
R13A1.4a.1 (12) | |||||||
R13A1.4b.1 (12) | |||||||
Genetics | Interpolated_map_position | IV | 3.29315 | ||||
Reference | WBPaper00002646 | ||||||
Method | Substitution_allele |