WormBase Tree Display for Variation: WBVar00102568
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WBVar00102568 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00102568 | |||
Other_name | pas7427 | ||||
haw49659 | |||||
cewivar00029762 | |||||
ZK1010.2.1:c.905+79A>T | |||||
HGVSg | CHROMOSOME_III:g.12976298T>A | ||||
Sequence_details | SMap | S_parent | Sequence | CHROMOSOME_III | |
Flanking_sequences | atatttaaaaaattcgatcatttttttttcgaaaaatgaagaaaatttaaaaatttaaagctaattttcagattaatcgatttttttctctaaatatcgcagtttttcgtaaaatcggattacaaaaatccgaaatttctgtgaatcatgttctggctctagatttttcgatttttacgtaaaaaaaaccaaaaaattctgatatgtatcgaaaaactcataaatttttcgattttttttcatgtttttagcaaaaaaacttctatcgaattcagtgtgcgccttttttggaatatattt | aaaaaaaaaacaaaattttttaaaggcgcacactctttttaatttgaatttttttcgcgattttttcagattcctaaccctatccgtctgtctagtgagaaatggcgtcccgtcatcgtataatatttctccaattcaggtcgttcccaatagaaatccttattcaacagggtacaatcaagattaatcgagtgtcgaagagctgcgaattctccggatctcatgagagcctgcttccggctccacggaatctttcccagagttagcgattttgtagtgttggagagtggctccgcaaga | |||
Mapping_target | CHROMOSOME_III | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | ||
WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | |||
WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
WBStrain00006631 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006642 | From_analysis | WGS_De_Bono | |||
WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022902 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023192 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | AX | ||||
RW | |||||
Person | WBPerson6900 | ||||
WBPerson1562 | |||||
Analysis | WGS_Pasadena_Quinlan | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
WGS_Hawaiian_Waterston | |||||
History | Acquires_merge (2) | ||||
Status | Live | ||||
Affects | Gene | WBGene00014176 | |||
Transcript | ZK1010.2.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | ZK1010.2.1:c.905+79A>T | ||||
Intron_number | 2/3 | ||||
Reference | WBPaper00037807 | ||||
Method | WGS_Pasadena_Quinlan |