WormBase Tree Display for Variation: WBVar00179002
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WBVar00179002 | Evidence | Paper_evidence | WBPaper00038208 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar00179002 | ||||
Other_name | haw46278 | |||||
haw145469 | ||||||
cewivar00197680 | ||||||
Y39A1A.31.1:c.302G>A | ||||||
CE54169:p.Gly101Glu | ||||||
HGVSg | CHROMOSOME_III:g.10687299C>T | |||||
Sequence_details | SMap | S_parent | Sequence | Y39A1A | ||
Flanking_sequences | aagtgcccaaaaaatttgtccgctt | cttttgatgttttcagcacgtgctt | ||||
Mapping_target | Y39A1A | |||||
Type_of_mutation | Substitution | C | T | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Predicted_SNP | ||||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | |||
WGS_Yanai | ||||||
Million_mutation_project_reanalysis | ||||||
Laboratory | RW | |||||
Person | WBPerson1562 | |||||
WBPerson4037 | ||||||
Analysis | WGS_Hawaiian_Waterston | |||||
WGS_Yanai | ||||||
Million_mutation_project_reanalysis | ||||||
History | Acquires_merge | WBVar00565334 | ||||
Status | Live | |||||
Affects | Gene | WBGene00306004 | ||||
Transcript | Y39A1A.31.1 | VEP_consequence | missense_variant | |||
VEP_impact | MODERATE | |||||
PolyPhen | 0.997 | probably_damaging | ||||
HGVSc | Y39A1A.31.1:c.302G>A | |||||
HGVSp | CE54169:p.Gly101Glu | |||||
cDNA_position | 302 | |||||
CDS_position | 302 | |||||
Protein_position | 101 | |||||
Exon_number | 2/2 | |||||
Codon_change | gGa/gAa | |||||
Amino_acid_change | G/E | |||||
Reference | WBPaper00038208 | |||||
Remark | [20081124 db] this Variation was previously named hw46278 | |||||
Method | WGS_Hawaiian_Waterston |