WormBase Tree Display for Variation: WBVar00000073
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| WBVar00000073 | Evidence | Paper_evidence | WBPaper00002912 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | ad952 | |||||
| Other_name | C48A7.1a.1:c.1115C>T | ||||||
| C48A7.1b.1:c.1115C>T | |||||||
| CE31165:p.Ser372Leu | |||||||
| CE28820:p.Ser372Leu | |||||||
| HGVSg | CHROMOSOME_IV:g.7409628C>T | ||||||
| Sequence_details | SMap | S_parent | Sequence | C48A7 | |||
| Flanking_sequences | ttgtcttgggagtcttgtctggagaattct | aaaagaacgagaaaaggcaagagcgagagg | |||||
| Mapping_target | C48A7 | ||||||
| Type_of_mutation | Substitution | c | t | Paper_evidence | WBPaper00002912 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00005527 | ||||||
| Laboratory | DA | ||||||
| Status | Live | ||||||
| Linked_to | WBVar02125351 | ||||||
| Affects | Gene | WBGene00001187 | |||||
| Transcript | C48A7.1a.1 | VEP_consequence | missense_variant | ||||
| VEP_impact | MODERATE | ||||||
| HGVSc | C48A7.1a.1:c.1115C>T | ||||||
| HGVSp | CE28820:p.Ser372Leu | ||||||
| cDNA_position | 1115 | ||||||
| CDS_position | 1115 | ||||||
| Protein_position | 372 | ||||||
| Exon_number | 6/17 | ||||||
| Codon_change | tCa/tTa | ||||||
| Amino_acid_change | S/L | ||||||
| C48A7.1b.1 | VEP_consequence | missense_variant | |||||
| VEP_impact | MODERATE | ||||||
| HGVSc | C48A7.1b.1:c.1115C>T | ||||||
| HGVSp | CE31165:p.Ser372Leu | ||||||
| cDNA_position | 1115 | ||||||
| CDS_position | 1115 | ||||||
| Protein_position | 372 | ||||||
| Exon_number | 6/18 | ||||||
| Codon_change | tCa/tTa | ||||||
| Amino_acid_change | S/L | ||||||
| Genetics | Interpolated_map_position | IV | 3.33438 | ||||
| Reference | WBPaper00002912 | ||||||
| Method | Substitution_allele |
