WormBase Tree Display for Variation: WBVar00000277
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| WBVar00000277 | Evidence | Paper_evidence | WBPaper00026799 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | ar575 | |||||
| Other_name | R107.8.1:c.3373A>G | ||||||
| CE00274:p.Lys1125Glu | |||||||
| HGVSg | CHROMOSOME_III:g.9062016T>C | ||||||
| Sequence_details | SMap | S_parent | Sequence | R107 | |||
| Flanking_sequences | aaagctggagccgatccaaccatctacaat | aatctgaacgaagtgctcttcatcaagcgg | |||||
| Mapping_target | R107 | ||||||
| Type_of_mutation | Substitution | a | g | Paper_evidence | WBPaper00026799 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | Allele | ||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Laboratory | GS | ||||||
| Status | Live | ||||||
| Affects | Gene | WBGene00003001 | |||||
| Transcript | R107.8.1 | VEP_consequence | missense_variant | ||||
| VEP_impact | MODERATE | ||||||
| SIFT | 0.03 | deleterious | |||||
| PolyPhen | 0.981 | probably_damaging | |||||
| HGVSc | R107.8.1:c.3373A>G | ||||||
| HGVSp | CE00274:p.Lys1125Glu | ||||||
| cDNA_position | 3457 | ||||||
| CDS_position | 3373 | ||||||
| Protein_position | 1125 | ||||||
| Exon_number | 9/12 | ||||||
| Codon_change | Aaa/Gaa | ||||||
| Amino_acid_change | K/E | ||||||
| Genetics | Interpolated_map_position | III | 0.131975 | ||||
| Reference | WBPaper00026799 | ||||||
| Method | Substitution_allele |
