WormBase Tree Display for Variation: WBVar00000488

WBVar00000488 Evidence: Paper_evidence: WBPaper00005019
  Name: Public_name: bn86
    Other_name: F54C1.3a.1:c.1008_1014del
      CE53747:p.Glu338Ter
      F54C1.3b.1:c.1008_1014del
      F54C1.3a.2:c.1008_1014del
      CE11046:p.Glu338Ter
    HGVSg: CHROMOSOME_I:g.4999483_4999489del
  Sequence_details: SMap: S_parent: Sequence: F54C1
    Flanking_sequences: cgagaatgcttggatgaataatgttaagca tttataagcgatacaaattataacaaagag
    Mapping_target: F54C1
    Type_of_mutation: Deletion
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: SS
    Status: Live
  Affects: Gene: WBGene00003221
    Transcript: F54C1.3a.1 VEP_consequence: frameshift_variant
        VEP_impact: HIGH
        HGVSc: F54C1.3a.1:c.1008_1014del
        HGVSp: CE11046:p.Glu338Ter
        cDNA_position: 1013-1019
        CDS_position: 1008-1014
        Protein_position: 336-338
        Exon_number: 8/17
        Codon_change: caTTTGGAG/ca
        Amino_acid_change: HLE/X
      F54C1.3b.1 VEP_consequence: frameshift_variant
        VEP_impact: HIGH
        HGVSc: F54C1.3b.1:c.1008_1014del
        HGVSp: CE53747:p.Glu338Ter
        cDNA_position: 1017-1023
        CDS_position: 1008-1014
        Protein_position: 336-338
        Exon_number: 8/16
        Codon_change: caTTTGGAG/ca
        Amino_acid_change: HLE/X
      F54C1.3a.2 VEP_consequence: frameshift_variant
        VEP_impact: HIGH
        HGVSc: F54C1.3a.2:c.1008_1014del
        HGVSp: CE11046:p.Glu338Ter
        cDNA_position: 1013-1019
        CDS_position: 1008-1014
        Protein_position: 336-338
        Exon_number: 8/18
        Codon_change: caTTTGGAG/ca
        Amino_acid_change: HLE/X
  Genetics: Interpolated_map_position: I -0.428848
    Mapping_data: In_multi_point: 2096
  Reference: WBPaper00005019
  Method: Deletion_allele