WormBase Tree Display for Variation: WBVar00000489
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WBVar00000489 | Evidence | Paper_evidence | WBPaper00028483 | ||
---|---|---|---|---|---|
Name | Public_name | bn87 | |||
HGVSg | CHROMOSOME_V:g.13432313_13433508del | ||||
Sequence_details | SMap | S_parent | Sequence | Y2H9A | |
Flanking_sequences | atcagttccatcacctcatactgtggaggt | ttaccgtaattgttgtagatctagtacata | |||
Mapping_target | Y2H9A | ||||
Type_of_mutation | Deletion | ||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Laboratory | SS | ||||
Status | Live | ||||
Affects | Gene | WBGene00003222 | |||
WBGene00005095 | |||||
Transcript | Y2H9A.2.1 | VEP_consequence | splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant | ||
VEP_impact | HIGH | ||||
Intron_number | 1/3 | ||||
Exon_number | 1/4 | ||||
Y2H9A.1.1 | VEP_consequence | coding_sequence_variant,3_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
cDNA_position | 2663-? | ||||
CDS_position | 2631-? | ||||
Protein_position | 877-? | ||||
Exon_number | 11-12/12 | ||||
Genetics | Interpolated_map_position | V | 5.3321 | ||
Reference | WBPaper00028483 | ||||
Method | Deletion_allele |