WormBase Tree Display for Variation: WBVar00000546
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WBVar00000546 | Evidence | Paper_evidence | WBPaper00029153 | |||||
---|---|---|---|---|---|---|---|---|
Name | Public_name | br9 | ||||||
Sequence_details | SeqStatus | Pending_curation | ||||||
Variation_type | Allele | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004754 | |||||||
WBStrain00005603 | ||||||||
Laboratory | DC | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00050877 | ||||||
Interactor | WBInteraction000052157 | |||||||
Description | Phenotype | WBPhenotype:0001420 | Paper_evidence | WBPaper00029153 | ||||
WBPaper00031925 | ||||||||
Curator_confirmed | WBPerson712 | |||||||
Remark | Animals are completely resistant to attachment of biofilm produced by Xenorhabdus nematophila. | Paper_evidence | WBPaper00031925 | |||||
Curator_confirmed | WBPerson712 | |||||||
Penetrance | Complete | Paper_evidence | WBPaper00029153 | |||||
WBPaper00031925 | ||||||||
Curator_confirmed | WBPerson712 | |||||||
Recessive | Paper_evidence | WBPaper00029153 | ||||||
Curator_confirmed | WBPerson712 | |||||||
Phenotype_assay | Treatment | Biofilm formation on adult worms was assessed for worms incubated 24-48 hours on the bacterial lawn. Alternatively, gravid adults were allowed to lay eggs on bacterial lawns for several hours, then removed and larvae were assessed for biofilm attachment the next day. | Paper_evidence | WBPaper00031925 | ||||
Curator_confirmed | WBPerson712 | |||||||
WBPhenotype:0001690 | Paper_evidence | WBPaper00029153 | ||||||
Curator_confirmed | WBPerson712 | |||||||
Remark | L1 specific mAb M37 binds animals from L1-L4 stage. | Paper_evidence | WBPaper00029153 | |||||
Curator_confirmed | WBPerson712 | |||||||
Recessive | Paper_evidence | WBPaper00029153 | ||||||
Curator_confirmed | WBPerson712 | |||||||
Phenotype_not_observed | WBPhenotype:0000676 | Paper_evidence | WBPaper00029153 | |||||
Curator_confirmed | WBPerson712 | |||||||
Remark | No growth defects were observed on standard E.coli OP50. In addition animals grew at the same rate on Yersinia pestis and Y. pseudotuburculosis as they did when fed E.coli. | Paper_evidence | WBPaper00029153 | |||||
Curator_confirmed | WBPerson712 | |||||||
Recessive | Paper_evidence | WBPaper00029153 | ||||||
Curator_confirmed | WBPerson712 | |||||||
WBPhenotype:0001209 | Paper_evidence | WBPaper00029153 | ||||||
Curator_confirmed | WBPerson712 | |||||||
Remark | N2 worms are skiddy on agar plated with Yersinia pseudotuberculosis, mutant animals are not skiddy on these bacterial lawns. | Paper_evidence | WBPaper00029153 | |||||
Curator_confirmed | WBPerson712 | |||||||
Motion was assayed on E.coli lawns. | Paper_evidence | WBPaper00029153 | ||||||
Curator_confirmed | WBPerson712 | |||||||
Recessive | Paper_evidence | WBPaper00029153 | ||||||
Curator_confirmed | WBPerson712 | |||||||
WBPhenotype:0001212 | Paper_evidence | WBPaper00029153 | ||||||
Curator_confirmed | WBPerson712 | |||||||
Remark | Based on the time it took for the last animal to stop thrashing when immersed in alkaline hypochlorite and the time the first animal suffered a visible breach in its cuticle. | Paper_evidence | WBPaper00029153 | |||||
Curator_confirmed | WBPerson712 | |||||||
Recessive | Paper_evidence | WBPaper00029153 | ||||||
Curator_confirmed | WBPerson712 | |||||||
WBPhenotype:0001411 | Paper_evidence | WBPaper00029153 | ||||||
Curator_confirmed | WBPerson712 | |||||||
Remark | As assayed by staining with wheat germ agglutinin (WGA). Wild type worms exhibit no staining except at the vulva. | Paper_evidence | WBPaper00029153 | |||||
Curator_confirmed | WBPerson712 | |||||||
Recessive | Paper_evidence | WBPaper00029153 | ||||||
Curator_confirmed | WBPerson712 | |||||||
WBPhenotype:0001413 | Paper_evidence | WBPaper00029153 | ||||||
Curator_confirmed | WBPerson712 | |||||||
Recessive | Paper_evidence | WBPaper00029153 | ||||||
Curator_confirmed | WBPerson712 | |||||||
Reference | WBPaper00031925 | |||||||
WBPaper00029153 | ||||||||
Method | Allele |