WormBase Tree Display for Variation: WBVar00001684

WBVar00001684 Evidence: Paper_evidence: WBPaper00030778
      WBPaper00055507
  Name: Public_name: WBVar00001684
    Other_name: cbs1666
      cb1666 Paper_evidence: WBPaper00055507
    HGVSg: chrIII:g.9136323A>C
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc2234
    Flanking_sequences: aaataggttgaatcgtatacaagaa gaatagctacaccaatggaggtgag
    Mapping_target: cb25.fpc2234
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00031443
    Transcript: CBG09948.1 VEP_consequence: stop_lost
        VEP_impact: HIGH
        HGVSc: CBG09948.1:c.538A>C
        HGVSp: CBP44436.1:p.Ter180ArgextTer?
        cDNA_position: 1030
        CDS_position: 538
        Protein_position: 180
        Exon_number: 5/18
        Codon_change: Tga/Cga
        Amino_acid_change: */R
  Reference: WBPaper00030778
    WBPaper00055507
  Remark: Predicted by: CrossMatch, Polybayes, ssaha-SNP v1.0, ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP