WormBase Tree Display for Variation: WBVar00002114

WBVar00002114 Evidence: Paper_evidence: WBPaper00030778
      WBPaper00055507
  Name: Public_name: WBVar00002114
    Other_name: cbs2534
      cb2534 Paper_evidence: WBPaper00055507
    HGVSg: chrX:g.8342142G>T
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc3857a
    Flanking_sequences: tcactcatttgcccaccaatcaaaa agtaacaccaatcgcctcggacaga
    Mapping_target: cb25.fpc3857a
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: CTNAG BstDEI, DdeI 546 454
      Polymorphic_strain_digest: CTNAG BstDEI, DdeI 454 359 187
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00089052
    Transcript: CBG27638.1 VEP_consequence: 3_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: CBG27638.1:c.*408C>A
        cDNA_position: 1290
        Exon_number: 6/6
  Reference: WBPaper00030778
    WBPaper00055507
  Remark: Predicted by: CrossMatch, Polybayes, ssaha-SNP v1.0, ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP