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WormBase Tree Display for Variation: WBVar00006346

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Name Class

WBVar00006346NamePublic_nameWBVar00006346
Other_namepas12866
cewivar00017797
T17H7.4c.1:c.88-543C>A
T17H7.4j.1:c.247-543C>A
T17H7.4a.1:c.88-543C>A
T17H7.4g.1:c.-684-543C>A
T17H7.4b.1:c.88-543C>A
HGVSgCHROMOSOME_III:g.743725G>T
Sequence_detailsSMapS_parentSequenceT17H7
Flanking_sequencesgagtagagtttattagtatttcgcttgaaaaaacttaaactggtcaaaaaccgccaattttcacaatgagacttcacaaaaaattttcgaaaatttttatggcgggttaaaatttcgaaaactaaagagccaaatttatagaggactagaggtaaactaacattaaatttaaactggtgaatgagacttaaccaactttatttatcatttgaaacaaactagtaaaatttcaaaaaattctaatcaattcatgaagaaaatttaaacgtcttcctattccttttcttgtaaaaattaaatttccatacaaatgtttaatcattttttccaaaactagagaagttaccttttattaaaaatataacataaactataaggctacggaacaagttataaagagatacttaaacgattattaacatgctcaatttttgaaagtttagctagatgtagtcacaatttttatccgtcattgaaggtggggttgcgccagtgaagattttttttaaatgcatatagtgatctaaaatagcctaataaaacattctaaaaaaatgtcagatttttcatattttccactccaaattttttttcatattt
Mapping_targetT17H7
Type_of_mutationSubstitutionGT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (17)
PersonWBPerson6900
AnalysisWGS_Pasadena_Quinlan
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00003936
TranscriptT17H7.4g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT17H7.4g.1:c.-684-543C>A
Intron_number2/18
T17H7.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT17H7.4c.1:c.88-543C>A
Intron_number1/17
T17H7.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT17H7.4b.1:c.88-543C>A
Intron_number1/15
T17H7.4j.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT17H7.4j.1:c.247-543C>A
Intron_number4/20
T17H7.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT17H7.4a.1:c.88-543C>A
Intron_number2/18
MethodWGS_Pasadena_Quinlan