WormBase Tree Display for Variation: WBVar00006786
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| WBVar00006786 | Name | Public_name | WBVar00006786 | ||
|---|---|---|---|---|---|
| Other_name | pas12954 | ||||
| B0412.1b.1:c.-281A>G | |||||
| B0412.1a.1:c.50-798A>G | |||||
| HGVSg | CHROMOSOME_III:g.817541A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | B0412 | |
| Flanking_sequences | ttttttgcctatttattccccacatgagcgtcatctaatacatgcttactctatcaaaaacgaaaaatcggtaaatatttatgtgtaggagcacttagaaatattagaaaatcacccgtacattacctgtgtgaggattttcggatggtaatccggatttgtcggtgggataacggggttgtgccagagaaaaatgaggataccttattttcgcgctcacttcaattcctattccatttcacatcaacatcaaacatacaaattctacctattgcttacaactattatcagtatttgatt | tatggatatcgatgaaagaggttgatgtacacatggtctaataacgcatgttgtttcagatttgagagttgtagtgatagtttaagcggcgaaactaaacttatcgccatttttttggaatttttttgaaaaacaatttcaatgttttagaggtgtttactatattaggcagataagcaattcggttagttaaaaattttttggtaggattgagtgaaaactcttaaaattgccgaaaaagtagtatttgggttattaagatgcatcaacagcgattagagcttgcagaatatttgaaga | |||
| Mapping_target | B0412 | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | ||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00000895 | |||
| Transcript | B0412.1b.1 | VEP_consequence | 5_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0412.1b.1:c.-281A>G | ||||
| cDNA_position | 72 | ||||
| Exon_number | 1/11 | ||||
| B0412.1a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0412.1a.1:c.50-798A>G | ||||
| Intron_number | 2/10 | ||||
| Method | WGS_Pasadena_Quinlan |
