WormBase Tree Display for Variation: WBVar00006811
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| WBVar00006811 | Name | Public_name | WBVar00006811 | ||
|---|---|---|---|---|---|
| Other_name | pas12959 | ||||
| cewivar00017971 | |||||
| B0412.1b.1:c.-260-55A>T | |||||
| B0412.1a.1:c.50-55A>T | |||||
| HGVSg | CHROMOSOME_III:g.818284A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | B0412 | |
| Flanking_sequences | ccactcataattttggaagtcgaccaaaaaattttttttcctacttttttatactgcaattttgtttttattatttttattaaaacattgtaggggtcggaacatgcgacattgctttggatctccttaaaagctctttttttttttggcactttgcaaaaatttgtccggaaattataaaaaatctaaaactttttggaatgtattattattatattaagtcgttctggatcattataaatgtatttagacaaaatccccaatggcgctacttcacctttaagctgagccataaaatgt | gtatgccaagcgtttccaaaaagaacagaaagagtgtaaaattaaaaattccaggcggattcgtgatcaacccatcttcttcttcttcctcatcgaacaattcctcatctaacacttcttcgtccaattttctatctccatatgagtatcaagaatcctcgacctcaccacgtgacactacagattcatctggtgaatcctcgttgtcctcttctggctcttcatcttcactgaatggttcttgtaatgttgcagccaagttgatcaagttccgcgggcataacgtcgccgcttttgaca | |||
| Mapping_target | B0412 | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (14) | |||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00000895 | |||
| Transcript | B0412.1b.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0412.1b.1:c.-260-55A>T | ||||
| Intron_number | 1/10 | ||||
| B0412.1a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | B0412.1a.1:c.50-55A>T | ||||
| Intron_number | 2/10 | ||||
| Method | WGS_Pasadena_Quinlan |
