WormBase Tree Display for Variation: WBVar00006866
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WBVar00006866 | Name | Public_name | WBVar00006866 | ||
---|---|---|---|---|---|
Other_name | pas12970 | ||||
haw37523 | |||||
haw139519 | |||||
cewivar00017996 | |||||
B0412.1b.1:c.228-109A>G | |||||
B0412.1a.1:c.537-109A>G | |||||
HGVSg | CHROMOSOME_III:g.820244A>G | ||||
Sequence_details | SMap | S_parent | Sequence | B0412 | |
Flanking_sequences | taatagttactcttttgttcggatacatttcttccagaataactacatcaatacttattgataaattcattattagaaaatatccgaaaaaaatatccgcccacctctgatgggagccctattgcaaaaagcgtccctcctggatgaagatttaccaaggttaacccggttttcgtagaagtttagcataaaggatcaaactttaaatgattgactgctactgttgagtacgtagttttgggaaaaaatagctctagtaaatatattagcaaatcattagagcattagttcagagattca | taggcactaatagttgaaattaatgtcccgaaaacattgctcctgaatttcaaaaaaatcattaaatttaagaagtacatctaaatattactaatccttcgctttcagtacccgccctgggcgcccatcaaaaagaagctttgatgattggaataacggcgcagtaataattaagaaagataaaacggattcaggtaaacttttcacagatatactcgattaattcaattttttagagcctgtgaatgggcccgtattcaaccaactaatgcaaccgcaaatgacgcctcaacaaatttt | |||
Mapping_target | B0412 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (33) | |||||
Laboratory | AX | ||||
RW | |||||
Person | WBPerson6900 | ||||
WBPerson4037 | |||||
WBPerson1562 | |||||
Analysis | WGS_Pasadena_Quinlan | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
WGS_Hawaiian_Waterston | |||||
History | Acquires_merge | WBVar00559384 | |||
WBVar01255213 | |||||
WBVar00032003 | |||||
WBVar01322511 | |||||
WBVar01389650 | |||||
Status | Live | ||||
Affects | Gene | WBGene00000895 | |||
Transcript | B0412.1b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | B0412.1b.1:c.228-109A>G | ||||
Intron_number | 5/10 | ||||
B0412.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | B0412.1a.1:c.537-109A>G | ||||
Intron_number | 5/10 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Method | WGS_Pasadena_Quinlan |