WormBase Tree Display for Variation: WBVar00007149

WBVar00007149 Evidence: Paper_evidence: WBPaper00030778
      WBPaper00055507
  Name: Public_name: WBVar00007149
    Other_name: cbs5365
      cb5365 Paper_evidence: WBPaper00055507
    HGVSg: chrIII:g.9777473T>G
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc2234
    Flanking_sequences: tggttacgagataagaagatgcaac cacgaaagcattcctccgagtgaat
    Mapping_target: cb25.fpc2234
    Type_of_mutation: Substitution: A G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: TCNNGA Hpy178III, Hpy188III 501 190 151 112 27 19
      Polymorphic_strain_digest: TCNNGA Hpy178III, Hpy188III 652 190 112 27 19
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00304184
    Transcript: CBG31476 VEP_consequence: splice_region_variant,intron_variant,non_coding_transcript_variant
        VEP_impact: LOW
        HGVSc: CBG31476.1:n.414+4A>C
        Intron_number: 4/6
  Reference: WBPaper00030778
    WBPaper00055507
  Remark: Predicted by: CrossMatch, Polybayes, ssaha-SNP v1.0, ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP