WormBase Tree Display for Variation: WBVar00007189
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WBVar00007189 | Evidence | Paper_evidence | WBPaper00030778 | |||
---|---|---|---|---|---|---|
WBPaper00055507 | ||||||
Name | Public_name | WBVar00007189 | ||||
Other_name | cbs5400 | |||||
cb5400 | Paper_evidence | WBPaper00055507 | ||||
Sequence_details | SMap | S_parent | Sequence | cb25.fpc2234 | ||
Flanking_sequences | ggaccccattttctctgtgctcaaa | gagaagatttacgggagcttcaacg | ||||
Mapping_target | cb25.fpc2234 | |||||
Type_of_mutation | Substitution | G | A | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Predicted_SNP | ||||||
RFLP | Reference_strain_digest | RGCY | CviJI, CviTI | 188 166 135 109 91 68 67 60 45 35 28 8 | ||
GTNNAC | Hpy8I | 420 358 182 40 | ||||
Polymorphic_strain_digest | RGCY | CviJI, CviTI | 166 135 109 95 93 91 68 67 60 45 35 28 8 | |||
GTNNAC | Hpy8I | 602 358 40 | ||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis briggsae | ||||
Strain | WBStrain00041077 | |||||
Laboratory | CP | |||||
Person | WBPerson3706 | |||||
WBPerson227 | ||||||
WBPerson225 | ||||||
Status | Live | |||||
Reference | WBPaper00030778 | |||||
WBPaper00055507 | ||||||
Remark | Predicted by: CrossMatch, Polybayes, ssaha-SNP v1.0, ssaha-SNP v2.0 | |||||
This SNP was observed in 1 sequencing read(s) | ||||||
Method | SNP |