WormBase Tree Display for Variation: WBVar00007229

WBVar00007229 Evidence: Paper_evidence: WBPaper00030778
      WBPaper00055507
  Name: Public_name: WBVar00007229
    Other_name: cbs5408
      cb5408 Paper_evidence: WBPaper00055507
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc2234
    Flanking_sequences: tctattgctatttcagtggttcttt tgtttctaccaagaaagcccctcta
    Mapping_target: cb25.fpc2234
    Type_of_mutation: Substitution: A G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: RAATTY AcsI, ApoI, XapI 710 111 91 88
        RGCY CviJI, CviTI 301 295 203 135 47 13 6
        TCNNGA Hpy178III, Hpy188III 489 153 150 124 43 23 10 8
        AATT Sse9I, TasI, Tsp509I, TspEI 260 193 133 89 88 73 71 38 23 20 12
      Polymorphic_strain_digest: RAATTY AcsI, ApoI, XapI 710 202 88
        RGCY CviJI, CviTI 301 295 138 135 65 47 13 6
        TCNNGA Hpy178III, Hpy188III 642 150 124 43 23 10 8
        AATT Sse9I, TasI, Tsp509I, TspEI 260 193 133 89 88 73 71 39 23 19 12
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Reference: WBPaper00030778
    WBPaper00055507
  Remark: Predicted by: CrossMatch, Polybayes, ssaha-SNP v1.0, ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP