WormBase Tree Display for Variation: WBVar00007244

WBVar00007244 Evidence: Paper_evidence: WBPaper00030778
      WBPaper00055507
  Name: Public_name: WBVar00007244
    Other_name: cbs5411
      cb5411 Paper_evidence: WBPaper00055507
    HGVSg
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc2234
    Flanking_sequences: ggagttagaatattcattcttactt accgtgtactatgctcagtggacag
    Mapping_target: cb25.fpc2234
    Type_of_mutation: Substitution: A T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: TTAA MseI, Tru1I, Tru9I 272 176 162 145 116 81 26 17 5
      Polymorphic_strain_digest: TTAA MseI, Tru1I, Tru9I 272 162 145 138 111 81 38 26 17 5 5
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00031616
    Transcript: CBG10153.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        Intron_number: 5/5
  Reference: WBPaper00030778
    WBPaper00055507
  Remark: Predicted by: Polybayes, ssaha-SNP v1.0, ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP