WormBase Tree Display for Variation: WBVar00008961
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| WBVar00008961 | Name | Public_name | WBVar00008961 | ||
|---|---|---|---|---|---|
| Other_name | pas13389 | ||||
| cewivar00112442 | |||||
| Y54G2A.23.1:c.341-28A>T | |||||
| HGVSg | CHROMOSOME_IV:g.2927905T>A | ||||
| Sequence_details | SMap | S_parent | Sequence | Y54G2A | |
| Flanking_sequences | aaataaattattattaataaaaaatagatttcaacaagtaaaattgcaataaaaacacacacgctaaaaacacgattatcacatgtagaacggcatgaaaaaaaaatcacagctcttctttgacatatttcggcttaagctcctcgatgcgcttgatgagctcggccttctcggtgcatcccttgcacacctctccccactcgccgagaatgtttttcagctctttcacgcgcattttcttcaaatcgatcgtcttccagtcgagtggcttgtctgtgaaatttggggatttatttattt | ttttttttgattaaaagcgagattatgcgccaaacgaaccgtatttaagctcacaaatctgagcatccttgcccttgagcttctccaaacagactttttccgttggcatcgaccaactgagcggcttggtgacctcgttcatgatggaagtggccgattctgggagtgcgccgatgtagaagcactgaaaatggataaaaattaaaaattttaaaggaaaattagattaaatcatttaaatctttaaatcccctacaaatttgttctccttgttgcgagtggtctcacaatgctctctga | |||
| Mapping_target | Y54G2A | ||||
| Type_of_mutation | Substitution | T | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00004604 | From_analysis | WGS_Pasadena_Quinlan | |||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00021888 | |||
| Transcript | Y54G2A.23.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | Y54G2A.23.1:c.341-28A>T | ||||
| Intron_number | 4/5 | ||||
| Method | WGS_Pasadena_Quinlan |
